BLASTX nr result

ID: Coptis21_contig00035715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035715
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica]               89   4e-16
emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]               89   4e-16
dbj|BAC22691.1| endo-1,4-beta-D-glucanase [Pyrus communis]             89   4e-16
gb|AFZ78641.1| korrigan [Populus tomentosa]                            88   8e-16
ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc...    88   8e-16

>emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica]
          Length = 620

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   PNLLTGAIVCGPDAYNNFGG--DNYEQTEPVTYNNAPLLGLLARLNSPHTAYDQLLSLPG 176
           PNLLTGAIV GPDAY+NF    DNYEQTEP TYNNAPLLG+LARLN+ H  Y+QLL +  
Sbjct: 446 PNLLTGAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGILARLNAGHGGYNQLLPVVT 505

Query: 177 TVSRFSSL 200
           T  + + L
Sbjct: 506 TQPKVAPL 513


>emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]
          Length = 620

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   PNLLTGAIVCGPDAYNNFGG--DNYEQTEPVTYNNAPLLGLLARLNSPHTAYDQLLSLPG 176
           PNLLTGAIV GPDAY+NF    DNYEQTEP TYNNAPLLG+LARLN+ H  Y+QLL +  
Sbjct: 446 PNLLTGAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGILARLNAGHGGYNQLLPVVT 505

Query: 177 TVSRFSSL 200
           T  + + L
Sbjct: 506 TQPKVAPL 513


>dbj|BAC22691.1| endo-1,4-beta-D-glucanase [Pyrus communis]
          Length = 620

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   PNLLTGAIVCGPDAYNNFGG--DNYEQTEPVTYNNAPLLGLLARLNSPHTAYDQLLSLPG 176
           PNLLTGAIV GPDAY+NF    DNYEQTEP TYNNAPLLG+LARLN+ H  Y+QLL +  
Sbjct: 446 PNLLTGAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGILARLNAGHGGYNQLLPVVT 505

Query: 177 TVSRFSSL 200
           T  + + L
Sbjct: 506 TQPKVAPL 513


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
 Frame = +3

Query: 3   PNLLTGAIVCGPDAYNNFGG--DNYEQTEPVTYNNAPLLGLLARLNSPHTAYDQLLS--L 170
           PNLLTGAIV GPDAY+NF    DNYEQTEP TYNNAPLLGLLARL+  H  Y+QLL   +
Sbjct: 446 PNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLSGGHGGYNQLLPVVV 505

Query: 171 PGTVSR 188
           PG + +
Sbjct: 506 PGPIEK 511


>ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466589|gb|AEO97207.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 622

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
 Frame = +3

Query: 3   PNLLTGAIVCGPDAYNNFGG--DNYEQTEPVTYNNAPLLGLLARLNSPHTAYDQLLS--L 170
           PNLLTGAIV GPDAY+NF    DNYEQTEP TYNNAPLLGLLARL+  H  Y+QLL   +
Sbjct: 446 PNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLSGGHGGYNQLLPVVV 505

Query: 171 PGTVSR 188
           PG + +
Sbjct: 506 PGPIEK 511


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