BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035678
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   165   3e-39
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   165   3e-39
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   165   3e-39
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   164   5e-39
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   160   8e-38

>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/92 (81%), Positives = 85/92 (92%)
 Frame = +2

Query: 2   SIIGGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVRK 181
           SIIGGLGLVGQPDKAR++LKEM EYGCYPD AAYNA IRNFCIAKR+ +A++L+DEMV K
Sbjct: 285 SIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNK 344

Query: 182 GLIPNATTYNLFFRIFYWSNDLGSSWNLYKRM 277
           GL PNATTYNLFFRIF+WSNDL S+WNLY+RM
Sbjct: 345 GLSPNATTYNLFFRIFFWSNDLQSAWNLYRRM 376


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/92 (81%), Positives = 85/92 (92%)
 Frame = +2

Query: 2   SIIGGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVRK 181
           SIIGGLGLVGQPDKAR++LKEM EYGCYPD AAYNA IRNFCIAKR+ +A++L+DEMV K
Sbjct: 285 SIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNK 344

Query: 182 GLIPNATTYNLFFRIFYWSNDLGSSWNLYKRM 277
           GL PNATTYNLFFRIF+WSNDL S+WNLY+RM
Sbjct: 345 GLSPNATTYNLFFRIFFWSNDLQSAWNLYRRM 376


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/92 (82%), Positives = 83/92 (90%)
 Frame = +2

Query: 2   SIIGGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVRK 181
           SIIGGLGLVGQPDKARD+L EM EYGCYPD AAYNAVIRN+CIAKR+ DA NLMDEM  K
Sbjct: 282 SIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASK 341

Query: 182 GLIPNATTYNLFFRIFYWSNDLGSSWNLYKRM 277
           GL PNATTYNLFFR+FYWSNDL +SW+LY+RM
Sbjct: 342 GLSPNATTYNLFFRVFYWSNDLRNSWSLYRRM 373


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = +2

Query: 5   IIGGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVRKG 184
           IIGGLGL+GQPDKAR+VLKEM EYGCYPDAAAYNA IRNFCIAKR+ DA+ L++EMV KG
Sbjct: 278 IIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKG 337

Query: 185 LIPNATTYNLFFRIFYWSNDLGSSWNLYKRM 277
           L PNATTYNLFFR+FYWSNDL SSWN+Y+RM
Sbjct: 338 LSPNATTYNLFFRVFYWSNDLQSSWNMYQRM 368


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/92 (81%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   SIIGGLGLVGQPDKARDVLKEMMEYGCYPDAAAYNAVIRNFCIAKRVMDAYNLMDEMVRK 181
           S+IGGLGLVGQPDKARDVLKEM EYG YPD  AYNA IRN+CIAKR+  A+ L+DEMV K
Sbjct: 271 SVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNK 330

Query: 182 GLIPNATTYNLFFRIFYWSNDLGSSWNLYKRM 277
           GL PNATTYNLFFR+FYWSNDL SSWNLYKRM
Sbjct: 331 GLSPNATTYNLFFRVFYWSNDLQSSWNLYKRM 362