BLASTX nr result

ID: Coptis21_contig00035637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035637
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...    64   2e-08
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   2e-08
ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    62   4e-08
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...    62   6e-08

>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +2

Query: 161 LFSVRIVSIDYYMSPPITDLDISYSTFQGAKVNEVP 268
           +FSVRIVSIDYY++PPI  LDISYS+FQG KVNEVP
Sbjct: 10  VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVP 45


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222413 [Cucumis sativus]
          Length = 2868

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +2

Query: 161 LFSVRIVSIDYYMSPPITDLDISYSTFQGAKVNEVP 268
           +FSVRIVSIDYY++PPI  LDISYS+FQG KVNEVP
Sbjct: 10  VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVP 45


>ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|222857392|gb|EEE94939.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
 Frame = +2

Query: 140 SQP-DFNTLFSVRIVSIDYYMSPPITDLDISYSTFQGAKVNEVP 268
           SQP D + +FS+RIVSID+YMSPPI  +DI YS+FQG KVNEVP
Sbjct: 3   SQPADSSKIFSLRIVSIDHYMSPPIPGVDICYSSFQGGKVNEVP 46


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
           gi|223548348|gb|EEF49839.1| DNA polymerase zeta
           catalytic subunit, putative [Ricinus communis]
          Length = 2066

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 164 FSVRIVSIDYYMSPPITDLDISYSTFQGAKVNEVP 268
           FSVRIVSIDYYM+PPI ++DI YS+FQG KVNEVP
Sbjct: 11  FSVRIVSIDYYMAPPIPNIDICYSSFQGGKVNEVP 45


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/47 (70%), Positives = 37/47 (78%)
 Frame = +2

Query: 128 MENISQPDFNTLFSVRIVSIDYYMSPPITDLDISYSTFQGAKVNEVP 268
           MEN SQ D   +FSVRIVS+DYYM+PPI DLDI YS+FQG  V EVP
Sbjct: 1   MEN-SQDDAK-IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVP 45


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