BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035495
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]    88   8e-16
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|NP_201359.1| pentatricopeptide repeat-containing protein [Ar...    78   9e-13
ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arab...    77   2e-12

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +2

Query: 86  QLNSLLTHPNWQKNPSLQKLTSSLTPFHVS--LNVNIDPKTALSFSNWVGNRHGYSHDVK 259
           QL S+L+ PNWQK+PSL+KL  SLTP HVS     N+DP+TALSF NW+  R G+ H+V 
Sbjct: 43  QLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVH 102

Query: 260 CYLSLLNLLIHAR 298
            Y S+LN+LI AR
Sbjct: 103 SYSSMLNILIRAR 115


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +2

Query: 86  QLNSLLTHPNWQKNPSLQKLTSSLTPFHVS--LNVNIDPKTALSFSNWVGNRHGYSHDVK 259
           QL S+L+ PNWQK+PSL+KL  SLTP HVS     N+DP+TALSF NW+  R G+ H+V 
Sbjct: 43  QLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVH 102

Query: 260 CYLSLLNLLIHAR 298
            Y S+LN+LI AR
Sbjct: 103 SYSSMLNILIRAR 115


>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449522905|ref|XP_004168466.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/70 (50%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
 Frame = +2

Query: 86  QLNSLLTHPNWQKNPSLQKLTSSLTPFHVS--LNVNIDPKTALSFSNWVGNRHGYSHDVK 259
           QL S+L+ PNWQK+PSL+ L  S+ P H+S    +N+DP+TAL+F NW+G +HG+ H+V+
Sbjct: 52  QLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQ 111

Query: 260 CYLSLLNLLI 289
            ++S+LN+L+
Sbjct: 112 SHVSMLNILV 121


>ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g65560 gi|8978284|dbj|BAA98175.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|110737310|dbj|BAF00601.1| hypothetical protein
           [Arabidopsis thaliana] gi|332010688|gb|AED98071.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 915

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
 Frame = +2

Query: 74  SPTHQLNSLLTHPNWQKNPSLQKLTSSLTPFHVS--LNVNIDPKTALSFSNWVGNRHGYS 247
           S  H+L S+L+ PNW K+PSL+ + S+++P HVS   ++++DPKTAL+FS+W+     Y 
Sbjct: 61  SVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYK 120

Query: 248 HDVKCYLSLLNLLIH 292
           H V  Y SLL LLI+
Sbjct: 121 HSVYSYASLLTLLIN 135


>ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata] gi|297328172|gb|EFH58591.1| hypothetical protein
           ARALYDRAFT_896436 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = +2

Query: 68  PDSPTHQLNSLLTHPNWQKNPSLQKLTSSLTPFHVS--LNVNIDPKTALSFSNWVGNRHG 241
           P    H L S+L+ PNWQ NPSL+ L  ++TP HVS   ++N+DP TAL FS W+     
Sbjct: 37  PSHLPHHLLSILSKPNWQNNPSLKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPN 96

Query: 242 YSHDVKCYLSLLNLLIH 292
           + H+V  Y SLL L+ H
Sbjct: 97  FKHNVDSYASLLTLIDH 113