BLASTX nr result

ID: Coptis21_contig00035489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035489
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40216.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230...    68   8e-10
ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago ...    67   2e-09
ref|XP_002532782.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>emb|CBI40216.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 46/90 (51%), Positives = 57/90 (63%)
 Frame = +3

Query: 234 PRRYVVFAEGNNGMNKDEKEINNGLNGKEEDMKKDERVTINFSWRDFLNPDPENIVAVGL 413
           PR+ VV AE  NG  K+ +E     NG  ED+KKD+   +N  WRD L+P+PENI+A+GL
Sbjct: 92  PRKLVVKAEKGNG--KEGEEEKRSKNGGGEDLKKDKGPILNVKWRDLLDPNPENILAIGL 149

Query: 414 TGVLTWASVQVLWQXXXXXXXXXXXXXKYS 503
           +GVLTWASVQVLWQ             KYS
Sbjct: 150 SGVLTWASVQVLWQLFFISLTILVAALKYS 179


>ref|XP_004164144.1| PREDICTED: uncharacterized protein LOC101230950 [Cucumis sativus]
          Length = 259

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
 Frame = +3

Query: 240 RYVVFAEGNN----GMNKDEKEINNGLNGKE---EDMKKDERVTINFSWRDFL-NPDPEN 395
           R + FA   N    G  K+ +   NG NG     +D+KK+     N  W + L +PDP+N
Sbjct: 150 RLISFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDN 209

Query: 396 IVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXXKYS 503
           I+AV LTG+L WASVQVLWQ             KYS
Sbjct: 210 ILAVALTGLLAWASVQVLWQLFFISLAILVAALKYS 245


>ref|XP_003590259.1| hypothetical protein MTR_1g050700 [Medicago truncatula]
           gi|355479307|gb|AES60510.1| hypothetical protein
           MTR_1g050700 [Medicago truncatula]
          Length = 144

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = +3

Query: 174 HNSHFTPTIFPKTQ-SQNLKSPRRYVVFAEGNNGMNKDEKEINNGL-----NGKEEDMKK 335
           H+  + P  F     + N + PR   + A  N+  N  ++E  N       +G+EE   +
Sbjct: 18  HSLRYQPQHFSTISITFNSRKPRPLPLSASNNSNSNGVKEEDKNSQQPPSSSGQEE---Q 74

Query: 336 DERVTINFSWRDFLNPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXXKYS 503
           D+R     +W   L+ DP+N++A+GLTG+LTWASVQVLWQ             KYS
Sbjct: 75  DKRPLFGLNWSSLLDRDPDNVLALGLTGILTWASVQVLWQLLFISLAILVAALKYS 130


>ref|XP_002532782.1| conserved hypothetical protein [Ricinus communis]
           gi|223527470|gb|EEF29601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
 Frame = +3

Query: 183 HFTPTIFP-KTQSQNLKSPRRYVVFAEGNNGMNK------DEKEINNGLN------GKEE 323
           HFT   FP KTQ +  K+   +++FA+ N+  N+       E++ NNG          ++
Sbjct: 21  HFTS--FPLKTQLKFSKTQSGFILFAQNNSNNNQIQEPSNQEQQQNNGSPKNSGDADNDD 78

Query: 324 DMKKDERVTINFSWRDFL-NPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXXKY 500
           D++       N    D L +PDP+NI+AVGLTG+L WAS QVLWQ             KY
Sbjct: 79  DLRGSRNSLFNIKLGDLLLDPDPDNILAVGLTGLLAWASAQVLWQLFVVSFAILVAALKY 138

Query: 501 S 503
           S
Sbjct: 139 S 139


>ref|XP_002315454.1| predicted protein [Populus trichocarpa] gi|222864494|gb|EEF01625.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
 Frame = +3

Query: 183 HFTPTIFPKTQSQNL-KSPRRYVVFAEGNNGMN------KDEKEINNGLN---GKEEDMK 332
           H  PT+ P +    + K     +VFA  NN  +      + E+E  NG +   G   D+K
Sbjct: 22  HPQPTLPPASFPLKISKKTHPRLVFARTNNNNDPAQEPKEPEQEKKNGSSNNSGGGYDLK 81

Query: 333 KDERVTI-NFSWRDFL-NPDPENIVAVGLTGVLTWASVQVLWQXXXXXXXXXXXXXKYS 503
           +D+   + +  W D L NPDP+NI+AVGLTG+L+WASVQVLWQ             KYS
Sbjct: 82  QDQPPPLFDIKWGDLLLNPDPDNILAVGLTGLLSWASVQVLWQLFVIALAILVAAVKYS 140


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