BLASTX nr result

ID: Coptis21_contig00035485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035485
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 4...   120   1e-25
ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 4...   120   1e-25
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 4...   115   3e-24
emb|CBI26345.3| unnamed protein product [Vitis vinifera]              115   3e-24

>ref|XP_003536205.1| PREDICTED: U-box domain-containing protein 44-like [Glycine max]
          Length = 1014

 Score =  120 bits (300), Expect = 1e-25
 Identities = 62/89 (69%), Positives = 76/89 (85%)
 Frame = +2

Query: 2   KSLALLSLASPDVLTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFE 181
           KSLA LS+A+ +VL+ IS+QVNRL NEMQ  KFEASQ+Q+QIV KL+  +KE K DQ F 
Sbjct: 115 KSLAALSIANTEVLSRISDQVNRLQNEMQREKFEASQSQIQIVDKLNQALKEQKHDQAFA 174

Query: 182 NDILEEIARAVGVPIEPSEISKELASLRQ 268
           ND+L+EIARAVGVP+EPSEISKELAS+R+
Sbjct: 175 NDMLKEIARAVGVPVEPSEISKELASIRK 203


>ref|XP_003519704.1| PREDICTED: U-box domain-containing protein 43-like [Glycine max]
          Length = 1018

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/89 (67%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   KSLALLSLASPDVLTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFE 181
           +SLA LS+A+ +VL+ IS+QVNRL +EMQ  +FEASQ+QLQIV KL+ GI+E K+DQ F 
Sbjct: 114 RSLAALSIANTEVLSRISDQVNRLQSEMQTVEFEASQSQLQIVDKLNHGIREQKLDQAFA 173

Query: 182 NDILEEIARAVGVPIEPSEISKELASLRQ 268
           ND+LEEI RAVGVP+EPSE+SKELAS+R+
Sbjct: 174 NDVLEEIGRAVGVPVEPSEVSKELASIRK 202


>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  120 bits (300), Expect = 1e-25
 Identities = 61/89 (68%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   KSLALLSLASPDVLTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFE 181
           +SLA LSLA+ +VL  IS+Q+NRL +EM+ A+FEAS +QLQIV KL+ G+++ K+DQGF 
Sbjct: 129 RSLAALSLANTEVLAGISDQMNRLQDEMRRAEFEASHSQLQIVDKLNQGLRDQKLDQGFA 188

Query: 182 NDILEEIARAVGVPIEPSEISKELASLRQ 268
           NDILEEIARAVGVP+EPSEISKELAS R+
Sbjct: 189 NDILEEIARAVGVPVEPSEISKELASFRR 217


>ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1016

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/89 (66%), Positives = 74/89 (83%)
 Frame = +2

Query: 2   KSLALLSLASPDVLTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFE 181
           +SLA LSLA+ +VL  IS+QVNRL NEMQ  +FEASQ+Q++IV KL+ GI + K+DQ F 
Sbjct: 113 RSLAALSLANTEVLAGISDQVNRLQNEMQRVEFEASQSQIKIVDKLNQGINDAKLDQDFA 172

Query: 182 NDILEEIARAVGVPIEPSEISKELASLRQ 268
           ND+LEEIA AVGVP+EPSEISKEL +LR+
Sbjct: 173 NDMLEEIAMAVGVPVEPSEISKELKNLRK 201


>emb|CBI26345.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/89 (66%), Positives = 74/89 (83%)
 Frame = +2

Query: 2   KSLALLSLASPDVLTDISEQVNRLHNEMQGAKFEASQTQLQIVQKLDLGIKEGKVDQGFE 181
           +SLA LSLA+ +VL  IS+QVNRL NEMQ  +FEASQ+Q++IV KL+ GI + K+DQ F 
Sbjct: 113 RSLAALSLANTEVLAGISDQVNRLQNEMQRVEFEASQSQIKIVDKLNQGINDAKLDQDFA 172

Query: 182 NDILEEIARAVGVPIEPSEISKELASLRQ 268
           ND+LEEIA AVGVP+EPSEISKEL +LR+
Sbjct: 173 NDMLEEIAMAVGVPVEPSEISKELKNLRK 201


Top