BLASTX nr result
ID: Coptis21_contig00035470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035470 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana] gi|3... 110 2e-22 ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arab... 110 2e-22 ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana] g... 110 2e-22 gb|AEL98739.1| endonuclease, partial [Silene latifolia] gi|34317... 109 2e-22 ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine... 106 2e-21 >ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana] gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] Length = 453 Score = 110 bits (274), Expect = 2e-22 Identities = 54/69 (78%), Positives = 61/69 (88%) Frame = -1 Query: 209 MGIKGLTKLLAIHAPNCKKERTLESYAGREIAIDASTIIYQFLIVVGRNGTQMLTNDAGE 30 MGIKGLTKLLA +AP+C KE+ ESY GR+IA+DAS IYQFLIVVGR GT+MLTN+AGE Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60 Query: 29 VTSHLQGMF 3 VTSHLQGMF Sbjct: 61 VTSHLQGMF 69 >ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata] gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata] Length = 448 Score = 110 bits (274), Expect = 2e-22 Identities = 54/69 (78%), Positives = 61/69 (88%) Frame = -1 Query: 209 MGIKGLTKLLAIHAPNCKKERTLESYAGREIAIDASTIIYQFLIVVGRNGTQMLTNDAGE 30 MGIKGLTKLLA +AP+C KE+ ESY GR+IA+DAS IYQFLIVVGR GT+MLTN+AGE Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60 Query: 29 VTSHLQGMF 3 VTSHLQGMF Sbjct: 61 VTSHLQGMF 69 >ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana] gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana] Length = 383 Score = 110 bits (274), Expect = 2e-22 Identities = 54/69 (78%), Positives = 61/69 (88%) Frame = -1 Query: 209 MGIKGLTKLLAIHAPNCKKERTLESYAGREIAIDASTIIYQFLIVVGRNGTQMLTNDAGE 30 MGIKGLTKLLA +AP+C KE+ ESY GR+IA+DAS IYQFLIVVGR GT+MLTN+AGE Sbjct: 1 MGIKGLTKLLADNAPSCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60 Query: 29 VTSHLQGMF 3 VTSHLQGMF Sbjct: 61 VTSHLQGMF 69 >gb|AEL98739.1| endonuclease, partial [Silene latifolia] gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia] Length = 325 Score = 109 bits (273), Expect = 2e-22 Identities = 54/69 (78%), Positives = 60/69 (86%) Frame = -1 Query: 209 MGIKGLTKLLAIHAPNCKKERTLESYAGREIAIDASTIIYQFLIVVGRNGTQMLTNDAGE 30 MGIKGLTKLLA +AP C KE+ ESY GR+IA+DAS IYQFLIVVGR GT+MLTN+AGE Sbjct: 1 MGIKGLTKLLADNAPKCMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 60 Query: 29 VTSHLQGMF 3 VTSHLQGMF Sbjct: 61 VTSHLQGMF 69 >ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max] Length = 382 Score = 106 bits (264), Expect = 2e-21 Identities = 54/69 (78%), Positives = 59/69 (85%) Frame = -1 Query: 209 MGIKGLTKLLAIHAPNCKKERTLESYAGREIAIDASTIIYQFLIVVGRNGTQMLTNDAGE 30 MGIKGLTKLLA +AP KE ESY GR+IAIDAS IYQFLIVVGR+GT+MLTN+AGE Sbjct: 1 MGIKGLTKLLADNAPKSMKENKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE 60 Query: 29 VTSHLQGMF 3 VTSHLQGMF Sbjct: 61 VTSHLQGMF 69