BLASTX nr result
ID: Coptis21_contig00035459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035459 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516925.1| pentatricopeptide repeat-containing protein,... 211 7e-53 ref|XP_002882500.1| pentatricopeptide repeat-containing protein ... 206 2e-51 ref|NP_187348.1| pentatricopeptide repeat-containing protein [Ar... 205 3e-51 ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ... 204 6e-51 ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|2... 204 6e-51 >ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 901 Score = 211 bits (536), Expect = 7e-53 Identities = 98/124 (79%), Positives = 111/124 (89%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 ++FE ME NR VPCAYAYNTMIMGYGSAGKFDEAY LLERQK +GCIPSVIAYNCILTCL Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383 Query: 185 GRKGRVDEALRIIEEMKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 G+KGR+ EALR EEMKKDA PNLSTYN+LIDMLC+AG++E+ ++ RDAM+ AGLFPNV Sbjct: 384 GKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM 443 Query: 365 TVNI 376 TVNI Sbjct: 444 TVNI 447 Score = 84.0 bits (206), Expect = 1e-14 Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 +LF M+ V +AYNT I G+ +GK ++AY+LLE K KG P+V+ Y ++ L Sbjct: 603 ELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGL 662 Query: 185 GRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + R+DEA + EE K + E N+ Y+ LID + G+I+ Y + + + GL PNV Sbjct: 663 AKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722 Query: 362 WTVN 373 +T N Sbjct: 723 YTWN 726 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE + N Y+++I G+G G+ DEAY ++E +KG P+V +NC+L L Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733 Query: 188 RKGRVDEALRIIEEMKK-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + ++EAL + MK PN TY+ILI+ LCR K + M++ GL PN Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793 Query: 365 T 367 T Sbjct: 794 T 794 Score = 72.0 bits (175), Expect = 5e-11 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L E M+ R P Y ++I G + DEAY L E K G +V+ Y+ ++ G Sbjct: 639 LLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFG 698 Query: 188 RKGRVDEALRIIEE-MKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + GR+DEA I+EE M+K PN+ T+N L+D L +A +I M+ PN Sbjct: 699 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758 Query: 365 TVNI 376 T +I Sbjct: 759 TYSI 762 Score = 67.8 bits (164), Expect = 9e-10 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE ++ +P +Y+ +I G AG E Y+L KE+GC+ AYN + Sbjct: 569 LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + G+V++A +++EEMK K +P + TY +ID L + +++ Y + + GL NV Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687 Score = 60.8 bits (146), Expect = 1e-07 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = +2 Query: 56 YNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK 235 YN I +G AGK D A+K K G +P + Y ++ L + R+DEA+ I E+M+ Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330 Query: 236 KDAE-PNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVN 373 ++ P YN +I AGK + Y + + G P+V N Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYN 377 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L+E M + ++P A Y ++I + G+ ++ +K+ + +GC P + N + C+ Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAG 346 + G + + EE+K + P++ +Y+ILI L +AG YE AM+ G Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612 Score = 58.5 bits (140), Expect = 5e-07 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 1/119 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 DL + M + P AY T+I S + D L + +E G SV + ++ Sbjct: 184 DLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVF 243 Query: 185 GRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 R+GR+D AL +++EMK + ++ YN+ ID +AGK++ ++ ++ GL P+ Sbjct: 244 AREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPD 302 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LF M+ + + T+I + G+ D A LL+ K ++ YN + C G Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279 Query: 188 RKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G+VD A + E+K P+ TY +I +LC+ +++ E + ME+ P + Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY 339 Query: 365 TVN 373 N Sbjct: 340 AYN 342 Score = 56.2 bits (134), Expect = 3e-06 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Frame = +2 Query: 41 PCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRI 220 P N MI A K DEA + E K C P + + ++ LG++GRVD+A R+ Sbjct: 440 PNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL 499 Query: 221 IEEM-KKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVN 373 E+M D PN Y LI + G+ E ++ M G P++ +N Sbjct: 500 YEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551 Score = 55.5 bits (132), Expect = 5e-06 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%) Frame = +2 Query: 2 GDLFETMELNRR--VPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCIL 175 G+ T E ++ P YN +I AG+ + A+K+ + KE G P+V+ N ++ Sbjct: 390 GEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449 Query: 176 TCLGRKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLF 352 L + ++DEA I E M K P+ T+ LID L + G+++ Y + M + Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509 Query: 353 PN 358 PN Sbjct: 510 PN 511 >ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 871 Score = 206 bits (523), Expect = 2e-51 Identities = 97/124 (78%), Positives = 110/124 (88%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 ++FE +E NRRVPC YAYNTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353 Query: 185 GRKGRVDEALRIIEEMKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G+VDEALR+ EEMKKDA PNLSTYNILIDMLCRAGK++ +E RD+M++AGLFPNV Sbjct: 354 RKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVR 413 Query: 365 TVNI 376 TVNI Sbjct: 414 TVNI 417 Score = 80.9 bits (198), Expect = 1e-13 Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 +LF +M+ V AYN +I G+ GK ++AY+LLE K KG P+V+ Y ++ L Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632 Query: 185 GRKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + R+DEA + EE K K E N+ Y+ LID + G+I+ Y + + + GL PNV Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692 Query: 362 WTVN 373 +T N Sbjct: 693 YTWN 696 Score = 73.2 bits (178), Expect = 2e-11 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE + R Y+++I G+G G+ DEAY +LE +KG P+V +N +L L Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALV 703 Query: 188 RKGRVDEALRIIEEMKK-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 + ++EAL + MK+ PN TY ILI+ LC+ K + M++ G+ P+ Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 +FE ++ R VP A +Y+ +I G AG +E Y+L KE+GC+ AYN ++ Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVY 316 + G+V++A +++EEMK K EP + TY +ID L + +++ Y Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642 Score = 70.1 bits (170), Expect = 2e-10 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L E M+ P Y ++I G + DEAY L E K K +V+ Y+ ++ G Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668 Query: 188 RKGRVDEALRIIEE-MKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + GR+DEA I+EE M+K PN+ T+N L+D L +A +I +M+ PN Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728 Query: 365 TVNI 376 T I Sbjct: 729 TYGI 732 Score = 64.3 bits (155), Expect = 1e-08 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LF+ M+ P + + T+I G+ G+ D A LL+ K ++ YN + G Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249 Query: 188 RKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G+VD A + E++ + +P+ TY +I +LC+A +++ E + +E+ P + Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309 Query: 365 TVN 373 N Sbjct: 310 AYN 312 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 D+ + M + P AY T+I + + D L ++ +E G P+V + ++ Sbjct: 154 DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213 Query: 185 GRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 ++GRVD AL +++EMK + + ++ YN+ ID + GK++ ++ +E GL P+ Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272 >ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana] gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 871 Score = 205 bits (522), Expect = 3e-51 Identities = 96/124 (77%), Positives = 111/124 (89%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 ++FE +E NRRVPC YAYNTMIMGYGSAGKFDEAY LLERQ+ KG IPSVIAYNCILTCL Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353 Query: 185 GRKGRVDEALRIIEEMKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G+VDEAL++ EEMKKDA PNLSTYNILIDMLCRAGK+++ +E RD+M++AGLFPNV Sbjct: 354 RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413 Query: 365 TVNI 376 TVNI Sbjct: 414 TVNI 417 Score = 79.7 bits (195), Expect = 2e-13 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 +LF +M+ V AYN +I G+ GK ++AY+LLE K KG P+V+ Y ++ L Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632 Query: 185 GRKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + R+DEA + EE K K E N+ Y+ LID + G+I+ Y + + + GL PN+ Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692 Query: 362 WTVN 373 +T N Sbjct: 693 YTWN 696 Score = 72.0 bits (175), Expect = 5e-11 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE + R Y+++I G+G G+ DEAY +LE +KG P++ +N +L L Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703 Query: 188 RKGRVDEALRIIEEMKK-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 + ++EAL + MK+ PN TY ILI+ LC+ K + M++ G+ P+ Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761 Score = 71.2 bits (173), Expect = 8e-11 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 1/124 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L E M+ P Y ++I G + DEAY L E K K +V+ Y+ ++ G Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668 Query: 188 RKGRVDEALRIIEE-MKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + GR+DEA I+EE M+K PNL T+N L+D L +A +I +M+ PN Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728 Query: 365 TVNI 376 T I Sbjct: 729 TYGI 732 Score = 70.9 bits (172), Expect = 1e-10 Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 +FE ++ R VP A +Y+ +I G AG +E Y+L KE+GC+ AYN ++ Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVY 316 + G+V++A +++EEMK K EP + TY +ID L + +++ Y Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642 Score = 64.3 bits (155), Expect = 1e-08 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LF+ M+ P + + T+I G+ G+ D A LL+ K ++ YN + G Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249 Query: 188 RKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G+VD A + E++ + +P+ TY +I +LC+A +++ E + +E+ P + Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309 Query: 365 TVN 373 N Sbjct: 310 AYN 312 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 D+ + M + P AY T+I + + D L ++ +E G P+V + ++ Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213 Query: 185 GRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 ++GRVD AL +++EMK + + ++ YN+ ID + GK++ ++ +E GL P+ Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272 >ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 906 Score = 204 bits (519), Expect = 6e-51 Identities = 94/124 (75%), Positives = 111/124 (89%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 +LFE ++LNR VPC YAYNTMIMGYGSAGKFDEAY LLERQK KGCIPSVIAYNCILTCL Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388 Query: 185 GRKGRVDEALRIIEEMKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 GRKG+V+EALRI +EM++DA PNL+TYNILIDMLC+AG++E+ + +D M+ AGLFPN+ Sbjct: 389 GRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448 Query: 365 TVNI 376 TVNI Sbjct: 449 TVNI 452 Score = 79.0 bits (193), Expect = 4e-13 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Frame = +2 Query: 53 AYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEM 232 AYNT+I G+ +GK D+AY+LLE K KG P+V+ Y ++ L + R+DEA + EE Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683 Query: 233 KK-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVN 373 K + N+ Y+ LID + G+I+ Y + + + GL PN +T N Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731 Score = 74.3 bits (181), Expect = 1e-11 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%) Frame = +2 Query: 56 YNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEMK 235 Y+++I G+G G+ DEAY +LE +KG P+ +NC+L L + +DEA + MK Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754 Query: 236 K-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 PN TY+I+I+ LC K + M++ GL PN Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPN 796 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L E M+ P Y +++ G + DEAY L E K G +V+ Y+ ++ G Sbjct: 644 LLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFG 703 Query: 188 RKGRVDEALRIIEE-MKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + GR+DEA I+EE M+K PN T+N L+D L +A +I+ M+ PN Sbjct: 704 KVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAM 763 Query: 365 TVNI 376 T +I Sbjct: 764 TYSI 767 Score = 69.7 bits (169), Expect = 2e-10 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE ++ VP +Y+ +I G AG E YKL KE+G V+AYN ++ Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + G+VD+A +++EEMK K +P + TY ++D L + +++ Y + + G+ NV Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692 Score = 63.2 bits (152), Expect = 2e-08 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L + M+ N YN I +G GK D A+K K +G +P + Y ++ L Sbjct: 260 LLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLC 319 Query: 188 RKGRVDEALRIIEEMKKD-AEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + R+DEA+ + EE+ + + P + YN +I AGK + Y + +R G P+V Sbjct: 320 KARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379 Query: 365 TVN 373 N Sbjct: 380 AYN 382 Score = 61.2 bits (147), Expect = 8e-08 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L+E M + ++P Y ++I + G+ ++ +K+ + +GC P ++ N + C+ Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563 Query: 188 RKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + G V++ + EE+K P++ +Y+ILI L +AG Y+ M+ GL +V Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL 623 Query: 365 TVN 373 N Sbjct: 624 AYN 626 Score = 59.7 bits (143), Expect = 2e-07 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Frame = +2 Query: 50 YAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEE 229 + + T++ + G+ D A LL+ K ++ YN + C G+ G+VD A + E Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHE 298 Query: 230 MK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVN 373 MK + P+ TY LI +LC+A +++ E + ++ P V+ N Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYN 347 Score = 58.2 bits (139), Expect = 7e-07 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Frame = +2 Query: 5 DLFETMELNRRV---PCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCIL 175 + F +E+ R+ P AY T+I +A + D L + +E G +V + ++ Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245 Query: 176 TCLGRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLF 352 R+GR+D AL +++EMK ++ +L YN+ ID + GK++ ++ M+ GL Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305 Query: 353 PN 358 P+ Sbjct: 306 PD 307 Score = 56.6 bits (135), Expect = 2e-06 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 1/113 (0%) Frame = +2 Query: 41 PCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRI 220 P + + ++I G G G+ D+AY L E+ + IP+V+ Y ++ + GR ++ +I Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539 Query: 221 IEEM-KKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVNI 376 +EM + P+L N +D + +AG++E + ++ GL P+V + +I Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSI 592 >ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa] Length = 764 Score = 204 bits (519), Expect = 6e-51 Identities = 93/124 (75%), Positives = 110/124 (88%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 ++FE ME NR+VPCAYAYNTMIMGYGSAGKFDEAY LLERQ+ KGCIPSV+AYNCILTCL Sbjct: 187 EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL 246 Query: 185 GRKGRVDEALRIIEEMKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 G+KG+ D+ALRI EEMK+DA PNL TYNI+I MLC+AG +E+ ++ RDAM+ AGLFPNV Sbjct: 247 GKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306 Query: 365 TVNI 376 T+NI Sbjct: 307 TINI 310 Score = 78.6 bits (192), Expect = 5e-13 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Frame = +2 Query: 53 AYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLGRKGRVDEALRIIEEM 232 AYNT+I G+ +GK ++AY+LLE K G P+V+ Y ++ L + R+DEA + EE Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541 Query: 233 KKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVWTVN 373 K + E N Y+ LID + G+++ Y + M + GL PNV+T N Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 1/121 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 LFE + N Y+++I G+G G+ DEAY ++E +KG P+V +NC+L L Sbjct: 537 LFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLV 596 Query: 188 RKGRVDEALRIIEEMKK-DAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + ++EAL + MK PN TY ILI+ LC+ K + M++ GL PN Sbjct: 597 KAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTI 656 Query: 365 T 367 T Sbjct: 657 T 657 Score = 65.9 bits (159), Expect = 3e-09 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 1/118 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L E M+ P Y +++ G + DEAY L E K G + + Y+ ++ G Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561 Query: 188 RKGRVDEALRIIEE-MKKDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 + GRVDEA ++EE M+K PN+ T+N L+D L +A +I +M+ PN Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPN 619 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 1/123 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 L + M+ N YN I +G GK D A+K K G +P + Y ++ L Sbjct: 118 LLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLC 177 Query: 188 RKGRVDEALRIIEEMKKDAE-PNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNVW 364 + R+DEA+ I E+M+++ + P YN +I AGK + Y + G P+V Sbjct: 178 KANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVV 237 Query: 365 TVN 373 N Sbjct: 238 AYN 240 Score = 59.3 bits (142), Expect = 3e-07 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = +2 Query: 5 DLFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCL 184 DL + M + P AY T+I G+ D L + +E G +V ++ Sbjct: 47 DLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVF 106 Query: 185 GRKGRVDEALRIIEEMKKDA-EPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPN 358 R+GRVD AL +++EMK + + ++ YN+ ID + GK++ ++ M+ GL P+ Sbjct: 107 SREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPD 165 Score = 56.2 bits (134), Expect = 3e-06 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = +2 Query: 8 LFETMELNRRVPCAYAYNTMIMGYGSAGKFDEAYKLLERQKEKGCIPSVIAYNCILTCLG 187 +FE M+ + +P YN +I AG + A+K+ + KE G P+V N ++ L Sbjct: 258 IFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLC 316 Query: 188 RKGRVDEALRIIEEMK-KDAEPNLSTYNILIDMLCRAGKIESVYETRDAMERAGLFPNV 361 + ++DEA I E M K P+ +T+ LID L + G+++ Y + M A PNV Sbjct: 317 KAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375