BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035454
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              103   1e-20
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   102   2e-20
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   100   9e-20
emb|CCH50966.1| T4.5 [Malus x robusta]                                100   2e-19
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               98   8e-19

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = -2

Query: 229 KWSCPHTPEQNGVVERKHRHILDMSRTLISQSCIPSKYWVDLFSTAVYLINRLPSSSLRF 50
           ++SCP  PEQNG+ ERKHRHI+D   TL++ + +PS YWVD F+TAVY+INRLPS  L +
Sbjct: 547 RFSCPKHPEQNGLAERKHRHIVDTGLTLLAHAHMPSTYWVDSFNTAVYIINRLPSRVLNY 606

Query: 49  ISPWEKLFHRKPNY 8
            SP+E+LFHR P Y
Sbjct: 607 ASPYEQLFHRVPQY 620


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = -2

Query: 235 IPKWSCPHTPEQNGVVERKHRHILDMSRTLISQSCIPSKYWVDLFSTAVYLINRLPSSSL 56
           I + SCPHT +QNG++ERKHRHI+++  TL++Q+ +P KYW D FSTAV+LINRLP+  L
Sbjct: 462 IHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVL 521

Query: 55  RFISPWEKLFHRKPNYS 5
           +   P+E LF+ KPNYS
Sbjct: 522 KQKCPYEFLFNSKPNYS 538


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/77 (57%), Positives = 60/77 (77%)
 Frame = -2

Query: 235 IPKWSCPHTPEQNGVVERKHRHILDMSRTLISQSCIPSKYWVDLFSTAVYLINRLPSSSL 56
           I + SCPHT +QNG++ERKHRHI+++  TL++Q+ +P KYW D FST V+LINRLP+  L
Sbjct: 708 IHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTXVFLINRLPTEVL 767

Query: 55  RFISPWEKLFHRKPNYS 5
           +   P+E LF+ KPNYS
Sbjct: 768 KQKCPYEFLFNSKPNYS 784


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -2

Query: 223  SCPHTPEQNGVVERKHRHILDMSRTLISQSCIPSKYWVDLFSTAVYLINRLPSSSLRFIS 44
            SC HT EQNG  ERKHRH+++M RTL+SQS +P+++WV+ F T VYLINRLP  S   IS
Sbjct: 882  SCLHTSEQNGCAERKHRHVVEMGRTLLSQSDLPTQFWVEAFQTVVYLINRLPPQS-SVIS 940

Query: 43   PWEKLFHRKPNY 8
            PWE LFH  P Y
Sbjct: 941  PWELLFHASPKY 952


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/72 (62%), Positives = 52/72 (72%)
 Frame = -2

Query: 223 SCPHTPEQNGVVERKHRHILDMSRTLISQSCIPSKYWVDLFSTAVYLINRLPSSSLRFIS 44
           S PHTPE NG+ ERKHRHIL+   TL++Q+ IP+ YW   F TAVYLINRLPSS L   S
Sbjct: 707 SLPHTPEHNGIAERKHRHILETGLTLLTQASIPTSYWTYAFGTAVYLINRLPSSVLNNES 766

Query: 43  PWEKLFHRKPNY 8
           P+ KLF   PNY
Sbjct: 767 PYSKLFKTSPNY 778