BLASTX nr result

ID: Coptis21_contig00035447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035447
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   281   1e-73
ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Viti...   274   1e-71
emb|CBI21566.3| unnamed protein product [Vitis vinifera]              272   6e-71
dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         270   3e-70
gb|ABO28526.1| glutamate receptor [Malus hupehensis]                  270   3e-70

>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
           gi|297745576|emb|CBI40741.3| unnamed protein product
           [Vitis vinifera]
          Length = 934

 Score =  281 bits (719), Expect = 1e-73
 Identities = 137/194 (70%), Positives = 166/194 (85%), Gaps = 2/194 (1%)
 Frame = -1

Query: 577 MEVVWVLLLFFFCG--TSFAASNNVSSRPAIVNIGAIFTFNSTIGRVAKIAMEAAVEDVN 404
           M V+W+L L F C    S  +  N+SSRPA+VN+GA+FTF STIGRVAKIA+E AV+DVN
Sbjct: 1   MNVIWLLSLLFLCFGVLSNGSQKNLSSRPAVVNVGAVFTFESTIGRVAKIAIEEAVKDVN 60

Query: 403 SDSRVLKGTKLVLKMQDSNCSGFIGLVEALQFMETDTIAIIGPQSSVLAHVISHVANELQ 224
           SD+ VL GTK VL M++SNCSGFIG++ ALQFMET+TIAIIGPQSSV+AH+ISHVANELQ
Sbjct: 61  SDAGVLTGTKFVLTMRNSNCSGFIGMIGALQFMETETIAIIGPQSSVVAHMISHVANELQ 120

Query: 223 VPLLSFAATDPSLSLLQFPYFVRTTQNDLYQMNAVADLIDYYGWKEVIVIYIDDDYGRNG 44
           VPLLSFAATDP+LS LQFP+FVRTTQ+DLYQM A+ +L+DYYGW+ VI I+IDDDYGRNG
Sbjct: 121 VPLLSFAATDPTLSSLQFPFFVRTTQSDLYQMKAITELVDYYGWRSVIAIFIDDDYGRNG 180

Query: 43  VAALGEGLTQKRCR 2
           V+AL + L +KR +
Sbjct: 181 VSALDDALAEKRLK 194


>ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Vitis vinifera]
          Length = 938

 Score =  274 bits (701), Expect = 1e-71
 Identities = 133/194 (68%), Positives = 164/194 (84%), Gaps = 2/194 (1%)
 Frame = -1

Query: 577 MEVVWVLLLFFFCG--TSFAASNNVSSRPAIVNIGAIFTFNSTIGRVAKIAMEAAVEDVN 404
           M++VW LLL  F     S     NVSSRP++VNIGAIF+FNSTIG+VAK A+EAAV+DVN
Sbjct: 1   MKMVWFLLLMVFLNGIISNGVGTNVSSRPSVVNIGAIFSFNSTIGKVAKFALEAAVQDVN 60

Query: 403 SDSRVLKGTKLVLKMQDSNCSGFIGLVEALQFMETDTIAIIGPQSSVLAHVISHVANELQ 224
           SD  VL GTKL L+ QD+N SGF  ++EALQFME DT+AIIGPQSSV+AHV+SH+ANELQ
Sbjct: 61  SDPTVLGGTKLKLRTQDTNFSGFGAIMEALQFMEGDTVAIIGPQSSVMAHVVSHIANELQ 120

Query: 223 VPLLSFAATDPSLSLLQFPYFVRTTQNDLYQMNAVADLIDYYGWKEVIVIYIDDDYGRNG 44
           VPL+S+AATDP+L  LQ+P+F+ TT +DLYQM A+ADL+DYYGW+EVI IY+DDDYGRNG
Sbjct: 121 VPLISYAATDPTLFSLQYPFFLMTTHSDLYQMAAIADLVDYYGWREVIAIYVDDDYGRNG 180

Query: 43  VAALGEGLTQKRCR 2
           +AALG+ LT+KRC+
Sbjct: 181 IAALGDELTKKRCK 194


>emb|CBI21566.3| unnamed protein product [Vitis vinifera]
          Length = 936

 Score =  272 bits (695), Expect = 6e-71
 Identities = 132/192 (68%), Positives = 162/192 (84%), Gaps = 2/192 (1%)
 Frame = -1

Query: 571 VVWVLLLFFFCG--TSFAASNNVSSRPAIVNIGAIFTFNSTIGRVAKIAMEAAVEDVNSD 398
           +VW LLL  F     S     NVSSRP++VNIGAIF+FNSTIG+VAK A+EAAV+DVNSD
Sbjct: 1   MVWFLLLMVFLNGIISNGVGTNVSSRPSVVNIGAIFSFNSTIGKVAKFALEAAVQDVNSD 60

Query: 397 SRVLKGTKLVLKMQDSNCSGFIGLVEALQFMETDTIAIIGPQSSVLAHVISHVANELQVP 218
             VL GTKL L+ QD+N SGF  ++EALQFME DT+AIIGPQSSV+AHV+SH+ANELQVP
Sbjct: 61  PTVLGGTKLKLRTQDTNFSGFGAIMEALQFMEGDTVAIIGPQSSVMAHVVSHIANELQVP 120

Query: 217 LLSFAATDPSLSLLQFPYFVRTTQNDLYQMNAVADLIDYYGWKEVIVIYIDDDYGRNGVA 38
           L+S+AATDP+L  LQ+P+F+ TT +DLYQM A+ADL+DYYGW+EVI IY+DDDYGRNG+A
Sbjct: 121 LISYAATDPTLFSLQYPFFLMTTHSDLYQMAAIADLVDYYGWREVIAIYVDDDYGRNGIA 180

Query: 37  ALGEGLTQKRCR 2
           ALG+ LT+KRC+
Sbjct: 181 ALGDELTKKRCK 192


>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  270 bits (689), Expect = 3e-70
 Identities = 129/194 (66%), Positives = 165/194 (85%), Gaps = 2/194 (1%)
 Frame = -1

Query: 577 MEVVWVLLLFFFCG--TSFAASNNVSSRPAIVNIGAIFTFNSTIGRVAKIAMEAAVEDVN 404
           M VVW+++    C    S   S N +SRPA+V++GAIFTF+STIGR AKIA++ AV+DVN
Sbjct: 6   MNVVWIIVSCIVCFGVCSDGLSRNGTSRPAVVSVGAIFTFDSTIGRAAKIAIQEAVKDVN 65

Query: 403 SDSRVLKGTKLVLKMQDSNCSGFIGLVEALQFMETDTIAIIGPQSSVLAHVISHVANELQ 224
           S+S +L+GTKLV+++Q+SNCSGF+G+V AL+FMETD +A+IGPQSSV+AH ISHVANELQ
Sbjct: 66  SNSSILQGTKLVVQLQNSNCSGFLGMVGALKFMETDVVAVIGPQSSVVAHTISHVANELQ 125

Query: 223 VPLLSFAATDPSLSLLQFPYFVRTTQNDLYQMNAVADLIDYYGWKEVIVIYIDDDYGRNG 44
           VP LSFAATDP+LS LQFPYF+RTTQ+DLYQM A+A++I++Y WKEVI I+IDDDYGRNG
Sbjct: 126 VPFLSFAATDPTLSSLQFPYFLRTTQSDLYQMTAIAEIIEFYAWKEVIAIFIDDDYGRNG 185

Query: 43  VAALGEGLTQKRCR 2
           V+AL + L  +RCR
Sbjct: 186 VSALDDALATRRCR 199


>gb|ABO28526.1| glutamate receptor [Malus hupehensis]
          Length = 946

 Score =  270 bits (689), Expect = 3e-70
 Identities = 124/195 (63%), Positives = 167/195 (85%), Gaps = 3/195 (1%)
 Frame = -1

Query: 577 MEVVWVLLLFFFCG---TSFAASNNVSSRPAIVNIGAIFTFNSTIGRVAKIAMEAAVEDV 407
           M +VW+L+L  FC    ++ A++ NVS+RP +VN+GAIF+F++ IG+VAK+A+EAAV+DV
Sbjct: 7   MSIVWLLVLMIFCNGLASNGASTTNVSTRPDVVNLGAIFSFDTIIGKVAKVAIEAAVKDV 66

Query: 406 NSDSRVLKGTKLVLKMQDSNCSGFIGLVEALQFMETDTIAIIGPQSSVLAHVISHVANEL 227
           NSD  VL GTK+++ MQDSN SG +G++EAL+FME DTIAIIGPQ++V AHVISH+ANEL
Sbjct: 67  NSDPSVLGGTKMIVTMQDSNYSGLLGIIEALRFMEKDTIAIIGPQNAVTAHVISHIANEL 126

Query: 226 QVPLLSFAATDPSLSLLQFPYFVRTTQNDLYQMNAVADLIDYYGWKEVIVIYIDDDYGRN 47
           QVPL+SF+ TDP+LS LQFP+FVR+TQNDLYQM A+A+++DYYGW+EVI +Y+DDD+GRN
Sbjct: 127 QVPLVSFSVTDPTLSALQFPFFVRSTQNDLYQMAAIAEMVDYYGWREVIALYVDDDHGRN 186

Query: 46  GVAALGEGLTQKRCR 2
           G+ AL   L +KRC+
Sbjct: 187 GITALANMLAEKRCK 201


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