BLASTX nr result

ID: Coptis21_contig00035427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035427
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138654.1| PREDICTED: vacuolar protein sorting-associat...   143   1e-32
ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associat...   142   3e-32
gb|AAG51892.1|AC016162_13 ARE1-like protein; 78992-73047 [Arabid...   142   4e-32
ref|NP_565015.1| Vps52 / Sac2-like protein [Arabidopsis thaliana...   142   4e-32

>ref|XP_004138654.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Cucumis sativus] gi|449490141|ref|XP_004158519.1|
           PREDICTED: vacuolar protein sorting-associated protein
           52 homolog [Cucumis sativus]
          Length = 698

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/90 (77%), Positives = 77/90 (85%)
 Frame = -3

Query: 271 HIAEASSLKYPCEVLFRSLHKLLMDDAISEYLFCDDLFGEKSMFIDIFAGPFSVIDEHFR 92
           HIAEASS+KYP EVLFRSLHKLLMD A SEY FCDD FGE+ MF DIFAGPF+VIDEHF 
Sbjct: 349 HIAEASSIKYPYEVLFRSLHKLLMDTATSEYNFCDDFFGEEPMFYDIFAGPFAVIDEHFT 408

Query: 91  *KLPNVYDAIGLMIMIQIIHQHRFIMSQKR 2
             LPN YDAIGLM+MI IIHQH+ IMS++R
Sbjct: 409 SILPNSYDAIGLMLMILIIHQHQLIMSRRR 438


>ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|222853914|gb|EEE91461.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = -3

Query: 271 HIAEASSLKYPCEVLFRSLHKLLMDDAISEYLFCDDLFGEKSMFIDIFAGPFSVIDEHFR 92
           HIAEA S KYP EVLFRSLHKLLMD A SEYLFCDD FGE+S+F +IFAGPF+V+DEHF 
Sbjct: 369 HIAEAGSQKYPYEVLFRSLHKLLMDTATSEYLFCDDFFGEESIFYEIFAGPFAVVDEHFN 428

Query: 91  *KLPNVYDAIGLMIMIQIIHQHRFIMSQKR 2
             LPN YDAIGLM+MI+IIHQH+ IMS++R
Sbjct: 429 SILPNCYDAIGLMLMIRIIHQHQLIMSRRR 458


>ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed
           protein product [Vitis vinifera]
          Length = 707

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/90 (74%), Positives = 79/90 (87%)
 Frame = -3

Query: 271 HIAEASSLKYPCEVLFRSLHKLLMDDAISEYLFCDDLFGEKSMFIDIFAGPFSVIDEHFR 92
           HIAEASS KYP EVLFRSLHKLLMD A SEYLFCDD FGE+++F +IFAGPF+VIDEHF 
Sbjct: 358 HIAEASSTKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEENIFYEIFAGPFAVIDEHFN 417

Query: 91  *KLPNVYDAIGLMIMIQIIHQHRFIMSQKR 2
             LPN +DAIGLM+MI+IIHQH+ +MS++R
Sbjct: 418 SILPNCFDAIGLMLMIRIIHQHQLVMSRRR 447


>gb|AAG51892.1|AC016162_13 ARE1-like protein; 78992-73047 [Arabidopsis thaliana]
          Length = 735

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = -3

Query: 271 HIAEASSLKYPCEVLFRSLHKLLMDDAISEYLFCDDLFGEKSMFIDIFAGPFSVIDEHFR 92
           HIAEASSLKYP EVLFRSLHKLLMD A SEY+FCDD FGE+S+F +IFAGPFSVIDEHF 
Sbjct: 386 HIAEASSLKYPYEVLFRSLHKLLMDTATSEYMFCDDFFGEESIFYEIFAGPFSVIDEHFN 445

Query: 91  *KLPNVYDAIGLMIMIQIIHQHRFIMSQKR 2
             L N +DAIGLM+MI+IIH H+ IMS++R
Sbjct: 446 PVLSNCFDAIGLMLMIRIIHHHQLIMSRRR 475


>ref|NP_565015.1| Vps52 / Sac2-like protein [Arabidopsis thaliana]
           gi|14194159|gb|AAK56274.1|AF367286_1 At1g71270/F3I17_8
           [Arabidopsis thaliana] gi|28416481|gb|AAO42771.1|
           At1g71270/F3I17_8 [Arabidopsis thaliana]
           gi|332197061|gb|AEE35182.1| Vps52 / Sac2-like protein
           [Arabidopsis thaliana]
          Length = 707

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = -3

Query: 271 HIAEASSLKYPCEVLFRSLHKLLMDDAISEYLFCDDLFGEKSMFIDIFAGPFSVIDEHFR 92
           HIAEASSLKYP EVLFRSLHKLLMD A SEY+FCDD FGE+S+F +IFAGPFSVIDEHF 
Sbjct: 358 HIAEASSLKYPYEVLFRSLHKLLMDTATSEYMFCDDFFGEESIFYEIFAGPFSVIDEHFN 417

Query: 91  *KLPNVYDAIGLMIMIQIIHQHRFIMSQKR 2
             L N +DAIGLM+MI+IIH H+ IMS++R
Sbjct: 418 PVLSNCFDAIGLMLMIRIIHHHQLIMSRRR 447


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