BLASTX nr result

ID: Coptis21_contig00035405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035405
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265790.1| PREDICTED: uncharacterized protein LOC100267...    66   3e-09
ref|XP_002303177.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09
ref|XP_003532975.1| PREDICTED: uncharacterized protein LOC100789...    65   6e-09
ref|XP_003547063.1| PREDICTED: uncharacterized protein LOC100807...    64   2e-08
ref|XP_002298192.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002265790.1| PREDICTED: uncharacterized protein LOC100267543 [Vitis vinifera]
          Length = 243

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
 Frame = -1

Query: 156 VKPKKPQFELEQVNVQYVGITPTSSTTLTN--PAIPSASLSLTIRMVFRAVNPN 1
           VKPKKPQF+L+QV VQY+GIT   S+T+    P   SASLSL I+M+F AVNPN
Sbjct: 72  VKPKKPQFDLQQVGVQYMGITANPSSTVAGSPPTPTSASLSLNIKMLFTAVNPN 125


>ref|XP_002303177.1| predicted protein [Populus trichocarpa] gi|222840609|gb|EEE78156.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 6/58 (10%)
 Frame = -1

Query: 156 VKPKKPQFELEQVNVQYVGIT---PTSS---TTLTNPAIPSASLSLTIRMVFRAVNPN 1
           VKPKKPQF+L+QV VQY+GIT   PT+S   TT T     +ASLSLTI M+F AVNPN
Sbjct: 73  VKPKKPQFDLQQVGVQYMGITASNPTASMDPTTATTTTPATASLSLTIHMLFTAVNPN 130


>ref|XP_003532975.1| PREDICTED: uncharacterized protein LOC100789962 [Glycine max]
          Length = 253

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 34/52 (65%), Positives = 39/52 (75%)
 Frame = -1

Query: 156 VKPKKPQFELEQVNVQYVGITPTSSTTLTNPAIPSASLSLTIRMVFRAVNPN 1
           VKPKKPQF+LEQV VQY+GITP S +T        ASLSLTIR++F A NPN
Sbjct: 92  VKPKKPQFDLEQVGVQYMGITPNSPST--------ASLSLTIRLLFAATNPN 135


>ref|XP_003547063.1| PREDICTED: uncharacterized protein LOC100807434 [Glycine max]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -1

Query: 156 VKPKKPQFELEQVNVQYVGITPTSSTTLTNPAIPSASLSLTIRMVFRAVNPN 1
           VKPKKPQF+LEQV VQY+GITP   +T        ASLSLTIR++F A NPN
Sbjct: 99  VKPKKPQFDLEQVGVQYMGITPNPPST--------ASLSLTIRLLFAATNPN 142


>ref|XP_002298192.1| predicted protein [Populus trichocarpa] gi|222845450|gb|EEE82997.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/58 (63%), Positives = 45/58 (77%), Gaps = 6/58 (10%)
 Frame = -1

Query: 156 VKPKKPQFELEQVNVQYVGIT---PTSS---TTLTNPAIPSASLSLTIRMVFRAVNPN 1
           VKPKKPQF+L+QV VQY+GI+   P++S   T+ T PA  SASLSLTI M+F AVNPN
Sbjct: 40  VKPKKPQFDLQQVGVQYMGISAPNPSASPDPTSTTTPA--SASLSLTINMLFTAVNPN 95


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