BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035392
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   160   8e-38
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   160   8e-38
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   156   2e-36
ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   155   3e-36
ref|XP_003588646.1| DNA topoisomerase, partial [Medicago truncat...   149   2e-34

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/127 (64%), Positives = 98/127 (77%)
 Frame = -3

Query: 383 RVQSAALALICDREMEIDEFKTQDYWTVDVEFNKLEPGSLGKISFSSHLTHLNSKKLEQL 204
           RVQSAALALICDREMEIDEFK Q+YWTV+VEFN+ +  S+    F S+LTH +SKKL Q 
Sbjct: 548 RVQSAALALICDREMEIDEFKPQEYWTVEVEFNRKQGSSMNSKFFPSYLTHFDSKKLNQF 607

Query: 203 XXXXXXXXXXXEQMMASSSFEVLGSKRSKSRRNPPTPYITSTLQQDAANKLNFTAGHTMK 24
                      EQ + S  F+V+GSKR+K R+NPPTPYITSTLQQDAANKL+F+A +TMK
Sbjct: 608 SISSHTEAKAIEQEINSLEFKVIGSKRNKMRKNPPTPYITSTLQQDAANKLHFSAMYTMK 667

Query: 23  LAQKLYE 3
           LAQ+LYE
Sbjct: 668 LAQRLYE 674


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/127 (64%), Positives = 98/127 (77%)
 Frame = -3

Query: 383 RVQSAALALICDREMEIDEFKTQDYWTVDVEFNKLEPGSLGKISFSSHLTHLNSKKLEQL 204
           RVQSAALALICDREMEIDEFK Q+YWTV+VEFN+ +  S+    F S+LTH +SKKL Q 
Sbjct: 561 RVQSAALALICDREMEIDEFKPQEYWTVEVEFNRKQGSSMNSKFFPSYLTHFDSKKLNQF 620

Query: 203 XXXXXXXXXXXEQMMASSSFEVLGSKRSKSRRNPPTPYITSTLQQDAANKLNFTAGHTMK 24
                      EQ + S  F+V+GSKR+K R+NPPTPYITSTLQQDAANKL+F+A +TMK
Sbjct: 621 SISSHTEAKAIEQEINSLEFKVIGSKRNKMRKNPPTPYITSTLQQDAANKLHFSAMYTMK 680

Query: 23  LAQKLYE 3
           LAQ+LYE
Sbjct: 681 LAQRLYE 687


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/127 (62%), Positives = 94/127 (74%)
 Frame = -3

Query: 383 RVQSAALALICDREMEIDEFKTQDYWTVDVEFNKLEPGSLGKISFSSHLTHLNSKKLEQL 204
           RVQSAAL+LICDREMEIDEFK ++YW V+V+  K E  S   ++F +HLTH +SKKL Q 
Sbjct: 429 RVQSAALSLICDREMEIDEFKPKEYWIVEVQLKKKELRSNKNLTFPAHLTHFDSKKLNQF 488

Query: 203 XXXXXXXXXXXEQMMASSSFEVLGSKRSKSRRNPPTPYITSTLQQDAANKLNFTAGHTMK 24
                      +  + S+ F V+  K+SKSRRNPPTPYITSTLQQDAANKL+FTA HTMK
Sbjct: 489 SITSDTEARDIQSTINSADFHVVSLKKSKSRRNPPTPYITSTLQQDAANKLHFTASHTMK 548

Query: 23  LAQKLYE 3
           LAQKLYE
Sbjct: 549 LAQKLYE 555


>ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1197

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/127 (61%), Positives = 94/127 (74%)
 Frame = -3

Query: 383 RVQSAALALICDREMEIDEFKTQDYWTVDVEFNKLEPGSLGKISFSSHLTHLNSKKLEQL 204
           RVQSAAL+LICDREMEIDEFK ++YWTV+V+  K E  S   ++F +HLTH +SKKL + 
Sbjct: 556 RVQSAALSLICDREMEIDEFKPKEYWTVEVQMKKKELRSNKNLTFPAHLTHFDSKKLNKF 615

Query: 203 XXXXXXXXXXXEQMMASSSFEVLGSKRSKSRRNPPTPYITSTLQQDAANKLNFTAGHTMK 24
                         + S+ F V+  K++KSRRNPPTPYITSTLQQDAANKL+FTA HTMK
Sbjct: 616 SITSDTEARDIRSNINSADFHVVSLKKNKSRRNPPTPYITSTLQQDAANKLHFTASHTMK 675

Query: 23  LAQKLYE 3
           LAQKLYE
Sbjct: 676 LAQKLYE 682


>ref|XP_003588646.1| DNA topoisomerase, partial [Medicago truncatula]
           gi|355477694|gb|AES58897.1| DNA topoisomerase, partial
           [Medicago truncatula]
          Length = 671

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/127 (59%), Positives = 90/127 (70%)
 Frame = -3

Query: 383 RVQSAALALICDREMEIDEFKTQDYWTVDVEFNKLEPGSLGKISFSSHLTHLNSKKLEQL 204
           RVQSAAL+LICDRE+EID+FK ++YWT++  FN  E      ++F +HLTH NS KL Q 
Sbjct: 159 RVQSAALSLICDRELEIDQFKPKEYWTMEAMFNMKEQRLTKDLTFLAHLTHFNSNKLNQF 218

Query: 203 XXXXXXXXXXXEQMMASSSFEVLGSKRSKSRRNPPTPYITSTLQQDAANKLNFTAGHTMK 24
                      E  + S+ F V+  KR+K RR PPTPYITSTLQQDAANKLNF+A HTMK
Sbjct: 219 SIISGEEARDIESKINSADFRVISMKRNKVRRKPPTPYITSTLQQDAANKLNFSASHTMK 278

Query: 23  LAQKLYE 3
           LAQKLYE
Sbjct: 279 LAQKLYE 285