BLASTX nr result

ID: Coptis21_contig00035390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035390
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...   116   2e-24
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...   116   2e-24
ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin...   110   9e-23
gb|ACU18444.1| unknown [Glycine max]                                  110   9e-23
ref|XP_003556806.1| PREDICTED: TPR repeat-containing thioredoxin...   109   3e-22

>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +3

Query: 3   ESLFHAQVALKKLRGEEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQ 182
           ESLFHAQVALKK RGEE+HNLKFGGEVEEVS  DQFRA +S PG +VVHFKAA++ QC+Q
Sbjct: 570 ESLFHAQVALKKSRGEEVHNLKFGGEVEEVSSLDQFRAAVSFPGVTVVHFKAASDLQCKQ 629

Query: 183 ISPFMDMLC 209
           ISPF+D+LC
Sbjct: 630 ISPFVDILC 638


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/69 (78%), Positives = 62/69 (89%)
 Frame = +3

Query: 3   ESLFHAQVALKKLRGEEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQ 182
           ESLFHAQVALKK RGEE+HNLKFGGEVEEVS  DQFRA +S PG +VVHFKAA++ QC+Q
Sbjct: 570 ESLFHAQVALKKSRGEEVHNLKFGGEVEEVSSLDQFRAAVSFPGVTVVHFKAASDLQCKQ 629

Query: 183 ISPFMDMLC 209
           ISPF+D+LC
Sbjct: 630 ISPFVDILC 638


>ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 692

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   ESLFHAQVALKKLRGEEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQ 182
           ESLFHAQVALKK RGEE+ NLKFGGEVEEVS  +QFRA ISLPG SVVHF+ A+N QC+Q
Sbjct: 564 ESLFHAQVALKKSRGEEVTNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEVASNSQCKQ 623

Query: 183 ISPFMDMLC 209
           ISPF++ LC
Sbjct: 624 ISPFVNTLC 632


>gb|ACU18444.1| unknown [Glycine max]
          Length = 377

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/69 (76%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   ESLFHAQVALKKLRGEEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQ 182
           ESLFHAQVALKK RGEE+ NLKFGGEVEEVS  +QFRA ISLPG SVVHF+ A+N QC+Q
Sbjct: 249 ESLFHAQVALKKSRGEEVTNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEVASNSQCKQ 308

Query: 183 ISPFMDMLC 209
           ISPF++ LC
Sbjct: 309 ISPFVNTLC 317


>ref|XP_003556806.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 676

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   ESLFHAQVALKKLRGEEIHNLKFGGEVEEVSDADQFRAVISLPGTSVVHFKAAANQQCEQ 182
           E+LFHAQVALKK RGEE+HNLKFGGEVE++S  +QFRA ISLPG SVV F+ A+N QC+Q
Sbjct: 548 ENLFHAQVALKKSRGEEVHNLKFGGEVEDISGLEQFRAAISLPGVSVVLFETASNMQCKQ 607

Query: 183 ISPFMDMLC 209
           ISPFM+ LC
Sbjct: 608 ISPFMNTLC 616


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