BLASTX nr result

ID: Coptis21_contig00035372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035372
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   276   1e-72
emb|CBI34885.3| unnamed protein product [Vitis vinifera]              276   1e-72
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]   276   1e-72
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   272   2e-71
gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]      214   5e-54

>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  276 bits (706), Expect = 1e-72
 Identities = 130/174 (74%), Positives = 150/174 (86%)
 Frame = -1

Query: 522  EALNLFEEMERRSAVAPTELTFLAVLFACSHCGLVDKAFRYFESMERVYGIKPKGRHYTC 343
            E+L LFEEMER S VAP EL  L+VLFACSHCGLVDK   YF SME+VYGIKPKG+HYTC
Sbjct: 532  ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591

Query: 342  LVDLLARSGRLTEAEELIKAMPFQPETNAWASLLSACSTYNNEEMAERTARKLWELSTEN 163
            +VDLL+RSGRL EAEE I+ +PFQPE NAWA+LLS C  Y +E++AERTA+KLW+L+  N
Sbjct: 592  VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENN 651

Query: 162  SAGYVLLSNIYASAGRWKDVSSVRKLMKGRNLKKIGGCSWIEVRNQVHSFYSED 1
            SAGYVLLSNIYASAGRW DVS++RKLM+ + LKK GGCSW+EVRNQVHSFYSED
Sbjct: 652  SAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSED 705


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  276 bits (706), Expect = 1e-72
 Identities = 130/174 (74%), Positives = 150/174 (86%)
 Frame = -1

Query: 522  EALNLFEEMERRSAVAPTELTFLAVLFACSHCGLVDKAFRYFESMERVYGIKPKGRHYTC 343
            E+L LFEEMER S VAP EL  L+VLFACSHCGLVDK   YF SME+VYGIKPKG+HYTC
Sbjct: 532  ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591

Query: 342  LVDLLARSGRLTEAEELIKAMPFQPETNAWASLLSACSTYNNEEMAERTARKLWELSTEN 163
            +VDLL+RSGRL EAEE I+ +PFQPE NAWA+LLS C  Y +E++AERTA+KLW+L+  N
Sbjct: 592  VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENN 651

Query: 162  SAGYVLLSNIYASAGRWKDVSSVRKLMKGRNLKKIGGCSWIEVRNQVHSFYSED 1
            SAGYVLLSNIYASAGRW DVS++RKLM+ + LKK GGCSW+EVRNQVHSFYSED
Sbjct: 652  SAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSED 705


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  276 bits (706), Expect = 1e-72
 Identities = 130/174 (74%), Positives = 150/174 (86%)
 Frame = -1

Query: 522  EALNLFEEMERRSAVAPTELTFLAVLFACSHCGLVDKAFRYFESMERVYGIKPKGRHYTC 343
            E+L LFEEMER S VAP EL  L+VLFACSHCGLVDK   YF SME+VYGIKPKG+HYTC
Sbjct: 532  ESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTC 591

Query: 342  LVDLLARSGRLTEAEELIKAMPFQPETNAWASLLSACSTYNNEEMAERTARKLWELSTEN 163
            +VDLL+RSGRL EAEE I+ +PFQPE NAWA+LLS C  Y +E++AERTA+KLW+L+  N
Sbjct: 592  VVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENN 651

Query: 162  SAGYVLLSNIYASAGRWKDVSSVRKLMKGRNLKKIGGCSWIEVRNQVHSFYSED 1
            SAGYVLLSNIYASAGRW DVS++RKLM+ + LKK GGCSW+EVRNQVHSFYSED
Sbjct: 652  SAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSED 705


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  272 bits (696), Expect = 2e-71
 Identities = 126/174 (72%), Positives = 149/174 (85%)
 Frame = -1

Query: 522  EALNLFEEMERRSAVAPTELTFLAVLFACSHCGLVDKAFRYFESMERVYGIKPKGRHYTC 343
            E+L LFEEME+ S++AP E+ FLAVLFACSH GLVDK   YF SME VYG+KPKGRH+TC
Sbjct: 532  ESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTC 591

Query: 342  LVDLLARSGRLTEAEELIKAMPFQPETNAWASLLSACSTYNNEEMAERTARKLWELSTEN 163
            +VD+L+R+GRL EAEE I +MPFQPETNAWA+LLS C TY NEE+AER A KLWE++ +N
Sbjct: 592  VVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKN 651

Query: 162  SAGYVLLSNIYASAGRWKDVSSVRKLMKGRNLKKIGGCSWIEVRNQVHSFYSED 1
             AGYVLLSNIYASAGRW+DV  VRKLMK + LKK GGCSW+E+R++VHSFYSED
Sbjct: 652  CAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSED 705


>gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
          Length = 788

 Score =  214 bits (546), Expect = 5e-54
 Identities = 102/172 (59%), Positives = 135/172 (78%)
 Frame = -1

Query: 522  EALNLFEEMERRSAVAPTELTFLAVLFACSHCGLVDKAFRYFESMERVYGIKPKGRHYTC 343
            E++ LFE+M   + + P E TFLA+LFACSH GLV++A  YF+ M+ + GI PK +HYTC
Sbjct: 595  ESILLFEDM-MATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQAL-GISPKEKHYTC 652

Query: 342  LVDLLARSGRLTEAEELIKAMPFQPETNAWASLLSACSTYNNEEMAERTARKLWELSTEN 163
            +VD+LAR+GRL EAE L+   P + E N+WA+LLSAC+TY NEE+AER A++L EL+ +N
Sbjct: 653  MVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDN 712

Query: 162  SAGYVLLSNIYASAGRWKDVSSVRKLMKGRNLKKIGGCSWIEVRNQVHSFYS 7
            +AGYVLLSN+YAS GRWKD + +R LMKG  LKK GGCSW++VR Q H+F+S
Sbjct: 713  TAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFS 764


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