BLASTX nr result
ID: Coptis21_contig00035368
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035368 (395 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat... 84 9e-15 ref|XP_002514843.1| pentatricopeptide repeat-containing protein,... 84 9e-15 ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat... 82 3e-14 ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containi... 80 1e-13 emb|CBI35203.3| unnamed protein product [Vitis vinifera] 80 1e-13 >ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 572 Score = 84.3 bits (207), Expect = 9e-15 Identities = 49/119 (41%), Positives = 74/119 (62%) Frame = -3 Query: 357 NTLILPEALELFDSLLHVKPSPPPIYPFNQLLGSISKLKHDQLILPLYKQMCFNTDVKKN 178 N + +AL LF+ +L ++P PP I F++LL SI+++KH +L LYKQM + + N Sbjct: 31 NVNTIDDALSLFNRMLRMRP-PPSIVDFSKLLTSITRMKHYSTVLSLYKQMD-SFGIPHN 88 Query: 177 IDVSTLTMLLSSFCQLSRVDLSFAVLGTIFKSGFEPVPRIFNCLIIGLFNENKCEEAME 1 TL +L++SFC L+R+ +F+VLG I K G++P F LI GL E K EA++ Sbjct: 89 --TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQ 145 >ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 594 Score = 84.3 bits (207), Expect = 9e-15 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 1/127 (0%) Frame = -3 Query: 378 IKDRCKSNTLI-LPEALELFDSLLHVKPSPPPIYPFNQLLGSISKLKHDQLILPLYKQMC 202 ++D+CK + +AL F+ ++H+ P P I FNQLL ++ ++KH ++ +Y++M Sbjct: 73 VRDKCKGGSFSNFDDALAYFNQMVHMNPFPC-ITQFNQLLAALVRMKHYDSVVSIYRKME 131 Query: 201 FNTDVKKNIDVSTLTMLLSSFCQLSRVDLSFAVLGTIFKSGFEPVPRIFNCLIIGLFNEN 22 F + V TLT+L++ C L V L F+VLG IFK GF+P FN LI GL E Sbjct: 132 F---FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEG 188 Query: 21 KCEEAME 1 + EAME Sbjct: 189 RIVEAME 195 >ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 592 Score = 82.4 bits (202), Expect = 3e-14 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Frame = -3 Query: 387 SHYIKDRCKS-NTLILPEALELFDSLLHVKPSPPPIYPFNQLLGSISKLKHDQLILPLYK 211 SH KS N + EAL F+ +LH++P PP + F ++L SI+ +KH +L L K Sbjct: 40 SHSSSFHSKSLNFNTIDEALSSFNRMLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSK 98 Query: 210 QMCFNTDVKKNIDVSTLTMLLSSFCQLSRVDLSFAVLGTIFKSGFEPVPRIFNCLIIGLF 31 QM + DV TL ++++SFC L+RVD F+VL IFK G +P F LI GL Sbjct: 99 QM---DSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLC 155 Query: 30 NENKCEEAM 4 E K EA+ Sbjct: 156 VEGKIGEAL 164 >ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein At1g62910-like [Vitis vinifera] Length = 539 Score = 80.5 bits (197), Expect = 1e-13 Identities = 48/115 (41%), Positives = 68/115 (59%) Frame = -3 Query: 345 LPEALELFDSLLHVKPSPPPIYPFNQLLGSISKLKHDQLILPLYKQMCFNTDVKKNIDVS 166 L +AL F +LH+ P PPPI+ F +LL SI+K+KH +L L K+M DV Sbjct: 37 LDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKM---DSFGIPPDVY 92 Query: 165 TLTMLLSSFCQLSRVDLSFAVLGTIFKSGFEPVPRIFNCLIIGLFNENKCEEAME 1 TLT++++SFC L+RVD + +VL I K G +P F L+ GL K EA++ Sbjct: 93 TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALD 147 >emb|CBI35203.3| unnamed protein product [Vitis vinifera] Length = 394 Score = 80.5 bits (197), Expect = 1e-13 Identities = 48/115 (41%), Positives = 68/115 (59%) Frame = -3 Query: 345 LPEALELFDSLLHVKPSPPPIYPFNQLLGSISKLKHDQLILPLYKQMCFNTDVKKNIDVS 166 L +AL F +LH+ P PPPI+ F +LL SI+K+KH +L L K+M DV Sbjct: 46 LDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKM---DSFGIPPDVY 101 Query: 165 TLTMLLSSFCQLSRVDLSFAVLGTIFKSGFEPVPRIFNCLIIGLFNENKCEEAME 1 TLT++++SFC L+RVD + +VL I K G +P F L+ GL K EA++ Sbjct: 102 TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALD 156