BLASTX nr result

ID: Coptis21_contig00035362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035362
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic su...   147   1e-33
gb|ACJ38666.1| cellulose synthase [Betula luminifera]                 145   4e-33
gb|ACC59197.1| cellulose synthase [Betula platyphylla]                143   1e-32
emb|CBI37171.3| unnamed protein product [Vitis vinifera]              137   7e-31
gb|AAX18648.1| cellulose synthase catalytic subunit [Pinus taeda]     122   4e-26

>ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like [Vitis vinifera]
          Length = 1044

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/86 (75%), Positives = 75/86 (87%)
 Frame = -2

Query: 260 MASNTMTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYE 81
           MASNTM GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+E
Sbjct: 1   MASNTMAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHE 59

Query: 80  CGFPACRLCYDYERSEGNQCCPQCNT 3
           CGFP C+ CY+YERSEGNQCCPQCNT
Sbjct: 60  CGFPVCKPCYEYERSEGNQCCPQCNT 85


>gb|ACJ38666.1| cellulose synthase [Betula luminifera]
          Length = 1049

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/88 (78%), Positives = 73/88 (82%), Gaps = 2/88 (2%)
 Frame = -2

Query: 260 MASNTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVAC 87
           MASN MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC
Sbjct: 1   MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60

Query: 86  YECGFPACRLCYDYERSEGNQCCPQCNT 3
           + CGFP CR CYDYERSEGNQ CPQCNT
Sbjct: 61  HVCGFPVCRPCYDYERSEGNQSCPQCNT 88


>gb|ACC59197.1| cellulose synthase [Betula platyphylla]
          Length = 1048

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/88 (78%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
 Frame = -2

Query: 260 MASNTMTG-LVAGSHRRNELHVMQNADEP-PPIRQSVSKNCRVCGDEIGLKDNGELFVAC 87
           MASN MTG LVAGSH RNELHV+   DE  PP RQSVSK CRVCGDEIG K++GELFVAC
Sbjct: 1   MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60

Query: 86  YECGFPACRLCYDYERSEGNQCCPQCNT 3
             CGFP CR CYDYERSEGNQ CPQCNT
Sbjct: 61  NVCGFPVCRPCYDYERSEGNQSCPQCNT 88


>emb|CBI37171.3| unnamed protein product [Vitis vinifera]
          Length = 1000

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/81 (74%), Positives = 70/81 (86%)
 Frame = -2

Query: 245 MTGLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYECGFPA 66
           M GLVAGSH RNE+HV+ + ++ PP RQSV K CRVCGDEIG+K +GELFVAC+ECGFP 
Sbjct: 1   MAGLVAGSHTRNEMHVL-HGEQRPPTRQSVPKLCRVCGDEIGVKADGELFVACHECGFPV 59

Query: 65  CRLCYDYERSEGNQCCPQCNT 3
           C+ CY+YERSEGNQCCPQCNT
Sbjct: 60  CKPCYEYERSEGNQCCPQCNT 80


>gb|AAX18648.1| cellulose synthase catalytic subunit [Pinus taeda]
          Length = 1057

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/79 (65%), Positives = 63/79 (79%)
 Frame = -2

Query: 239 GLVAGSHRRNELHVMQNADEPPPIRQSVSKNCRVCGDEIGLKDNGELFVACYECGFPACR 60
           GLVAGS++RNEL V+   D P PIR+S  ++C+VCGD+IG   NGELFVAC ECGFP CR
Sbjct: 6   GLVAGSYKRNELMVVPGHDGPKPIRRSTLQDCQVCGDKIGHNPNGELFVACNECGFPVCR 65

Query: 59  LCYDYERSEGNQCCPQCNT 3
            CY+YER +GN+CCPQC T
Sbjct: 66  PCYEYERKDGNRCCPQCKT 84


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