BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035334
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    79   4e-13
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    77   1e-12
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    75   6e-12
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    75   6e-12

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
 Frame = -2

Query: 495 WIKWINPAEDVMMLNTDGAVG-EYNGFGGVFRNWQGTVAMAFTGSSPSKSVIGQELRAIV 319
           W  W  P    + LNTDG+V  ++ GFGG+ R+ +G    AF   +P   +   EL AI 
Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330

Query: 318 EGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLDVKHIC 139
            G+ +A+  G K + V SDS+ AV  +N  +S     +  +        +FE   V H  
Sbjct: 331 RGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAW 390

Query: 138 REGNQVADYLSKLCKSWEDSI 76
           RE N+ ADYLSK+     D +
Sbjct: 391 RETNKAADYLSKMVLERNDVV 411


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
 Frame = -2

Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334
           A+   W  W  P      LNTDG++   N GFGG+FR+  G    A+   +    +   E
Sbjct: 260 ARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVE 319

Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154
           L AI  G+ +A   G K + V SDS+ AV  +N ++       + +    V   +FE   
Sbjct: 320 LWAIWRGLVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYL 379

Query: 153 VKHICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMY 4
           V H  RE N+ AD+LSK+  S  D +           +++++ D  G MY
Sbjct: 380 VSHTWRETNKAADFLSKMDLSGND-VVLGTADFPNGLNSIIKDDAEGRMY 428


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = -2

Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334
           A+   W +W  P    + LNTDG++   N G GG+FR+++G     F   +    +   E
Sbjct: 159 ARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVE 218

Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154
           L AI  G+ +A++   + + V SDSL  VN +N ++      D  +    +   +F+   
Sbjct: 219 LWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHK 278

Query: 153 VKHICREGNQVADYLSKL 100
           V H  RE N+ ADYL+K+
Sbjct: 279 VSHSWRETNRAADYLAKM 296


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = -2

Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334
           A+   W  W  P      LNTDG++   N GFGG+FR+  G    A+   +    +   E
Sbjct: 147 ARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVE 206

Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154
           L AI  G+ +A   G K + V SDS+  V  +N ++       + +    V   +FE   
Sbjct: 207 LWAIWRGLVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYR 266

Query: 153 VKHICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMY 4
           V H  RE N+ AD+LS++  S  D +           +++++ D  G MY
Sbjct: 267 VSHTWRETNKAADFLSRMDLSGSD-VVLGTADFPNGLNSIIKDDAEGRMY 315


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
 Frame = -2

Query: 495  WIKWINPAEDVMMLNTDGA-VGE--YNGFGGVFRNWQGTVAMAFTGSSPSKS-VIGQELR 328
            ++KW N   +  +LN DG+ +G     GFGG+ RN  G     F G  PS S ++  EL 
Sbjct: 701  YVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELT 760

Query: 327  AIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLDVK 148
            AI +G+  AID G   + V SDSL ++N++    S+ ++    +      +       + 
Sbjct: 761  AIYDGINTAIDMGITDMAVYSDSLLSINLIT-TTSSKFHIHAALIQDIRDKLSLRNFSLN 819

Query: 147  HICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMYL 1
            H  REGNQ ADYL+KL    + ++     P D     L++ D  GT++L
Sbjct: 820  HTLREGNQSADYLAKLGAMSDVNVLIHQSPPD-ELCPLLKNDAAGTLFL 867