BLASTX nr result
ID: Coptis21_contig00035334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035334 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm... 79 4e-13 ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264... 77 1e-12 ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera] 75 6e-12 gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 75 6e-12 >ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis] gi|223533283|gb|EEF35036.1| conserved hypothetical protein [Ricinus communis] Length = 437 Score = 79.0 bits (193), Expect = 4e-13 Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 1/141 (0%) Frame = -2 Query: 495 WIKWINPAEDVMMLNTDGAVG-EYNGFGGVFRNWQGTVAMAFTGSSPSKSVIGQELRAIV 319 W W P + LNTDG+V ++ GFGG+ R+ +G AF +P + EL AI Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330 Query: 318 EGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLDVKHIC 139 G+ +A+ G K + V SDS+ AV +N +S + + +FE V H Sbjct: 331 RGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAW 390 Query: 138 REGNQVADYLSKLCKSWEDSI 76 RE N+ ADYLSK+ D + Sbjct: 391 RETNKAADYLSKMVLERNDVV 411 >ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera] Length = 431 Score = 77.0 bits (188), Expect = 1e-12 Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 1/170 (0%) Frame = -2 Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334 A+ W W P LNTDG++ N GFGG+FR+ G A+ + + E Sbjct: 260 ARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVE 319 Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154 L AI G+ +A G K + V SDS+ AV +N ++ + + V +FE Sbjct: 320 LWAIWRGLVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYL 379 Query: 153 VKHICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMY 4 V H RE N+ AD+LSK+ S D + +++++ D G MY Sbjct: 380 VSHTWRETNKAADFLSKMDLSGND-VVLGTADFPNGLNSIIKDDAEGRMY 428 >ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1| predicted protein [Populus trichocarpa] Length = 329 Score = 75.5 bits (184), Expect = 4e-12 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%) Frame = -2 Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334 A+ W +W P + LNTDG++ N G GG+FR+++G F + + E Sbjct: 159 ARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVE 218 Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154 L AI G+ +A++ + + V SDSL VN +N ++ D + + +F+ Sbjct: 219 LWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHK 278 Query: 153 VKHICREGNQVADYLSKL 100 V H RE N+ ADYL+K+ Sbjct: 279 VSHSWRETNRAADYLAKM 296 >emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera] Length = 318 Score = 75.1 bits (183), Expect = 6e-12 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 1/170 (0%) Frame = -2 Query: 510 AKHATWIKWINPAEDVMMLNTDGAVGEYN-GFGGVFRNWQGTVAMAFTGSSPSKSVIGQE 334 A+ W W P LNTDG++ N GFGG+FR+ G A+ + + E Sbjct: 147 ARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVE 206 Query: 333 LRAIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLD 154 L AI G+ +A G K + V SDS+ V +N ++ + + V +FE Sbjct: 207 LWAIWRGLVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYR 266 Query: 153 VKHICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMY 4 V H RE N+ AD+LS++ S D + +++++ D G MY Sbjct: 267 VSHTWRETNKAADFLSRMDLSGSD-VVLGTADFPNGLNSIIKDDAEGRMY 315 >gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H [Medicago truncatula] Length = 869 Score = 75.1 bits (183), Expect = 6e-12 Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 4/169 (2%) Frame = -2 Query: 495 WIKWINPAEDVMMLNTDGA-VGE--YNGFGGVFRNWQGTVAMAFTGSSPSKS-VIGQELR 328 ++KW N + +LN DG+ +G GFGG+ RN G F G PS S ++ EL Sbjct: 701 YVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELT 760 Query: 327 AIVEGMKIAIDRGYKKVTVCSDSLRAVNILNGRESAPWYCDNMVASFAVFRNQFEVLDVK 148 AI +G+ AID G + V SDSL ++N++ S+ ++ + + + Sbjct: 761 AIYDGINTAIDMGITDMAVYSDSLLSINLIT-TTSSKFHIHAALIQDIRDKLSLRNFSLN 819 Query: 147 HICREGNQVADYLSKLCKSWEDSISFLLPPLDRRASALVEMDRVGTMYL 1 H REGNQ ADYL+KL + ++ P D L++ D GT++L Sbjct: 820 HTLREGNQSADYLAKLGAMSDVNVLIHQSPPD-ELCPLLKNDAAGTLFL 867