BLASTX nr result

ID: Coptis21_contig00035318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035318
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinu...   108   6e-22
ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinest...   106   2e-21
ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   103   2e-20
gb|AFW59628.1| pectinesterase [Zea mays]                               79   4e-13

>ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinus communis]
           gi|223544682|gb|EEF46198.1| Pectinesterase-2 precursor,
           putative [Ricinus communis]
          Length = 527

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 13/99 (13%)
 Frame = +3

Query: 6   LALVNQMGQDQKSTMSND------------DFPGWMPAKNRKLLQT-TVQANAVVAKDGS 146
           LALVN++  D  + +  +            DFP W+ AK+RKLLQ+ T++ANAVVAKDG+
Sbjct: 169 LALVNRITGDHDNKLKKNSTRSRYLGEEIQDFPKWVSAKDRKLLQSSTIKANAVVAKDGT 228

Query: 147 GDYMSVSEAIQAASGARFVIYVKAGVYKEKIHTNKDGIT 263
           G+Y +VSEAI+AA G RFVIYVKAGVYKEKI TNKDGIT
Sbjct: 229 GNYETVSEAIKAAGGGRFVIYVKAGVYKEKIRTNKDGIT 267


>ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinesterase inhibitor 54-like
           [Vitis vinifera]
          Length = 506

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 7/93 (7%)
 Frame = +3

Query: 6   LALVNQMGQDQKSTMSNDD------FPGWMPAKNRKLLQTT-VQANAVVAKDGSGDYMSV 164
           LA++N++    K T S         FP W+  ++RKLLQTT ++ANA+VA+DG+G+Y ++
Sbjct: 153 LAVINRITPGPKKTTSGRGLSEEQVFPSWVSPRDRKLLQTTTIKANAIVAQDGTGNYETI 212

Query: 165 SEAIQAASGARFVIYVKAGVYKEKIHTNKDGIT 263
           S+AIQAA+G RFVIYVK+GVYKEKIHTNKDGIT
Sbjct: 213 SDAIQAATGKRFVIYVKSGVYKEKIHTNKDGIT 245


>ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|222833508|gb|EEE71985.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 12/99 (12%)
 Frame = +3

Query: 3   TLALVNQMGQDQKSTMSNDD-----------FPGWMPAKNRKLLQT-TVQANAVVAKDGS 146
           +LALV+++  D  + + N             FP W+ AK+RKLLQT T++ANAVVAKDG+
Sbjct: 175 SLALVSRITHDYGTKLKNSTKRRRAEEKSQGFPKWVSAKDRKLLQTSTIKANAVVAKDGT 234

Query: 147 GDYMSVSEAIQAASGARFVIYVKAGVYKEKIHTNKDGIT 263
           G+Y ++SEAI AA G RFVIYVKAGVYKEKI +NKDGIT
Sbjct: 235 GNYKTISEAINAAPGKRFVIYVKAGVYKEKIRSNKDGIT 273


>ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable
           pectinesterase/pectinesterase inhibitor 54-like [Glycine
           max]
          Length = 514

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/95 (60%), Positives = 72/95 (75%), Gaps = 8/95 (8%)
 Frame = +3

Query: 3   TLALVNQMGQDQKSTMSND------DFPGWMPAKNRKLLQ-TTVQANAVVAKDGSGDYMS 161
           +LALVNQM       + ++      +FP W+ +K RKLLQ  T++ANA+VA+DGSG+Y +
Sbjct: 158 SLALVNQMSTTTSHNIGDNNNEKEHEFPIWVSSKGRKLLQGATIKANAIVAQDGSGNYKT 217

Query: 162 VSEAIQAASGA-RFVIYVKAGVYKEKIHTNKDGIT 263
           VSEAI+AASG  RFVIYVK GVYKEKI+TNKDGIT
Sbjct: 218 VSEAIEAASGTTRFVIYVKEGVYKEKINTNKDGIT 252


>gb|AFW59628.1| pectinesterase [Zea mays]
          Length = 728

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +3

Query: 30  QDQKSTMSNDDFPGWMPAKNRKLLQTTVQANAVVAKDGSGDYMSVSEAIQAASG---ARF 200
           QD +S +   DFP W+PA  R+LLQ T + N VVA+DGSGD+ +++EAI A       RF
Sbjct: 385 QDGRSGVPPSDFPKWLPATQRRLLQQTQKPNTVVAQDGSGDFKTITEAITAVPNTFEGRF 444

Query: 201 VIYVKAGVYKEKIHTNKD 254
           VIYVKAG YKE +   K+
Sbjct: 445 VIYVKAGTYKEYVTVPKN 462


Top