BLASTX nr result

ID: Coptis21_contig00035265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035265
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002524389.1| protein binding protein, putative [Ricinus c...   100   2e-19
ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782...    96   3e-18
emb|CBI27081.3| unnamed protein product [Vitis vinifera]               96   3e-18

>ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|222851248|gb|EEE88795.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  104 bits (260), Expect = 7e-21
 Identities = 59/102 (57%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
 Frame = -1

Query: 295 AVQEESSKPLPSAPVTTQA--PILPLPSPT--NQKLNGPPFTYHNCTNRGHERGRRSGIS 128
           A    +  P PS PV TQA  PILPLP P+  + K NG  F   +   RG ERGR SG S
Sbjct: 424 AAAAAAPSPEPSVPVATQAQPPILPLPVPSRASHKPNGATFHARH-GYRGRERGRGSGSS 482

Query: 127 RPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKESDSKQDDG 2
           RPVT FTE+FDF AMNEKFKKDEVWG LGK NK     ++DG
Sbjct: 483 RPVTKFTEDFDFIAMNEKFKKDEVWGHLGKNNKSHSKDREDG 524


>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
           gi|223536350|gb|EEF38000.1| protein binding protein,
           putative [Ricinus communis]
          Length = 665

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/106 (54%), Positives = 68/106 (64%), Gaps = 14/106 (13%)
 Frame = -1

Query: 280 SSKPLPSAPVTTQA--PILPLPSPT--NQKLNGPPFTYHNCTNRGHERGRRSGISRPVTT 113
           +S   PS PV T+A  PILPLP P   + K NG PF +     RG ERGR +G S PVT 
Sbjct: 453 TSSTEPSVPVVTEAQPPILPLPVPARASHKPNGAPF-HSRQGYRGRERGRGTGNSHPVTK 511

Query: 112 FTEEFDFTAMNEKFKKDEVWGDLGKANK----------ESDSKQDD 5
           FTE+FDF AMNEKFKKDEVWG LGK+NK          E DS+++D
Sbjct: 512 FTEDFDFMAMNEKFKKDEVWGHLGKSNKKDREDGKASDEDDSQEED 557


>ref|XP_002315966.1| predicted protein [Populus trichocarpa] gi|222865006|gb|EEF02137.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/102 (56%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
 Frame = -1

Query: 292 VQEESSKPLPSAPVTTQA--PILPLPSPT--NQKLNGPPFTY-HNCTNRGHERGRRSGIS 128
           V + S  P PS P TT+A  PILPLP PT  + K NG  F   H    RG  RGR  G S
Sbjct: 420 VVKVSPAPEPSVPATTEAQPPILPLPFPTRASHKPNGATFNARHGYHGRG--RGRGYGSS 477

Query: 127 RPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKESDSKQDDG 2
           RP+T FTE+FDF AMNEKFKKDEVWG LGK NK     ++DG
Sbjct: 478 RPLTKFTEDFDFMAMNEKFKKDEVWGHLGKNNKSHSKDREDG 519


>ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782890 [Glycine max]
          Length = 610

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
 Frame = -1

Query: 280 SSKPLPSAPVT--TQAPILPLP---SPTNQKLNGPPFTYHNCTNRGHERGRRSGISRPVT 116
           +S P PS PV+  TQ PILPLP    P+ +    P  T+H    RG  RGR +G   PVT
Sbjct: 410 TSSPEPSVPVSAETQPPILPLPVTSRPSYRPGGAPSQTHHGYNYRGRGRGRGTGGLHPVT 469

Query: 115 TFTEEFDFTAMNEKFKKDEVWGDLGKANKESDSKQDDG 2
            FTE+FDF AMNEKFKKDEVWG LGK+  +S SK+ DG
Sbjct: 470 KFTEDFDFMAMNEKFKKDEVWGHLGKS--KSHSKEKDG 505


>emb|CBI27081.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
 Frame = -1

Query: 295 AVQEESSKPLPSAPVTTQAPILPLPSP--TNQKLNGPPFTYHNCTNRGHERGRRSGISRP 122
           +  +ESS P+ +     Q PILPLP P  T QKLNG PF   +   RG  RGR +G SRP
Sbjct: 363 SASQESSVPVSAE---AQPPILPLPVPSRTVQKLNGAPFQGRH-GYRG--RGRGTGGSRP 416

Query: 121 VTTFTEEFDFTAMNEKFKKDEVWGDLGKANK-ESDSKQDDG 2
           VT FTE+FDF AMNEKFKKDEVWG LGK NK +S  K+ DG
Sbjct: 417 VTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDG 457


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