BLASTX nr result

ID: Coptis21_contig00035250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035250
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis...   183   1e-44
emb|CBI19037.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
gb|ABS52574.1| nodulin family protein [Gossypium hirsutum]            174   7e-42
ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [...   174   9e-42

>ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 389

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/134 (67%), Positives = 109/134 (81%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397 EPVIDQNLFYMGMKYTSATFATAILNIQPAVTFIMAIIFRLEKVKIKSIHSQAKIAGTIV 218
           EPV+DQNL+Y+GMKYTSATFA+A +N+ PA+TFI+AIIFRLEK+ IK I SQAK+ GT++
Sbjct: 92  EPVLDQNLYYVGMKYTSATFASATVNVLPAITFILAIIFRLEKINIKKIPSQAKVIGTLI 151

Query: 217 SLGGAMIMTLYKGPIIDMIWSTR--ENHSGSTSTSTAQNWFVGTLMLLASCSTWSGFFIL 44
           ++ GAM+MTLYKGPIID I  TR   +H  S+  S  QNW  GTLMLL SC  WSGFFIL
Sbjct: 152 TVTGAMVMTLYKGPIIDFI-HTRGISHHESSSDPSAGQNWATGTLMLLGSCFGWSGFFIL 210

Query: 43  QSITLKEYPAELSL 2
           QS TLK+YPAELSL
Sbjct: 211 QSFTLKQYPAELSL 224


>emb|CBI19037.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/134 (67%), Positives = 109/134 (81%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397 EPVIDQNLFYMGMKYTSATFATAILNIQPAVTFIMAIIFRLEKVKIKSIHSQAKIAGTIV 218
           EPV+DQNL+Y+GMKYTSATFA+A +N+ PA+TFI+AIIFRLEK+ IK I SQAK+ GT++
Sbjct: 92  EPVLDQNLYYVGMKYTSATFASATVNVLPAITFILAIIFRLEKINIKKIPSQAKVIGTLI 151

Query: 217 SLGGAMIMTLYKGPIIDMIWSTR--ENHSGSTSTSTAQNWFVGTLMLLASCSTWSGFFIL 44
           ++ GAM+MTLYKGPIID I  TR   +H  S+  S  QNW  GTLMLL SC  WSGFFIL
Sbjct: 152 TVTGAMVMTLYKGPIIDFI-HTRGISHHESSSDPSAGQNWATGTLMLLGSCFGWSGFFIL 210

Query: 43  QSITLKEYPAELSL 2
           QS TLK+YPAELSL
Sbjct: 211 QSFTLKQYPAELSL 224


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397 EPVIDQNLFYMGMKYTSATFATAILNIQPAVTFIMAIIFRLEKVKIKSIHSQAKIAGTIV 218
           EPV+DQNL+Y+GMKYTSATFA+A +N  PA+TFIMA+IFRLE V  K +HS AK+ GT++
Sbjct: 79  EPVLDQNLYYLGMKYTSATFASATVNALPAITFIMALIFRLETVNFKKLHSAAKVVGTVI 138

Query: 217 SLGGAMIMTLYKGPIIDMIWSTRENHSGSTSTSTA-QNWFVGTLMLLASCSTWSGFFILQ 41
           ++ GAM+MTLYKGPIID I S    H G+TS ++  Q+W  GTLMLLASC  W+ FFILQ
Sbjct: 139 TVTGAMVMTLYKGPIIDFIRSQGAAHRGTTSNASGNQHWLTGTLMLLASCCGWASFFILQ 198

Query: 40  SITLKEYPAELSL 2
           S TLK+YPAELSL
Sbjct: 199 SFTLKKYPAELSL 211


>gb|ABS52574.1| nodulin family protein [Gossypium hirsutum]
          Length = 385

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/132 (61%), Positives = 106/132 (80%)
 Frame = -2

Query: 397 EPVIDQNLFYMGMKYTSATFATAILNIQPAVTFIMAIIFRLEKVKIKSIHSQAKIAGTIV 218
           EPV+DQNL+Y+GMK+T+AT+++A +N+ PAVTFIMA+IFRLEK+ +K IHS AK+ GT +
Sbjct: 93  EPVLDQNLYYLGMKFTTATYSSAFVNMLPAVTFIMAMIFRLEKINLKKIHSIAKVVGTAI 152

Query: 217 SLGGAMIMTLYKGPIIDMIWSTRENHSGSTSTSTAQNWFVGTLMLLASCSTWSGFFILQS 38
           ++GGAM+MTLYKGPIID + S    H  + + S  Q+W  GT+MLL S + WS FFILQS
Sbjct: 153 TVGGAMVMTLYKGPIIDFVKSGGATHHSTNTESADQHWVSGTIMLLGSIAGWSSFFILQS 212

Query: 37  ITLKEYPAELSL 2
            TLK+YPAELSL
Sbjct: 213 FTLKKYPAELSL 224


>ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
           gi|302141836|emb|CBI19039.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/132 (59%), Positives = 106/132 (80%)
 Frame = -2

Query: 397 EPVIDQNLFYMGMKYTSATFATAILNIQPAVTFIMAIIFRLEKVKIKSIHSQAKIAGTIV 218
           EP++DQNL Y+GM+YTSA+F +A++N  PAVTF+MA++FRLE +KIK   SQAKI GT++
Sbjct: 92  EPILDQNLSYLGMQYTSASFTSAVMNAVPAVTFVMAVVFRLEHIKIKERRSQAKIVGTVL 151

Query: 217 SLGGAMIMTLYKGPIIDMIWSTRENHSGSTSTSTAQNWFVGTLMLLASCSTWSGFFILQS 38
           +  GA++MTLYKGPIID+IWS + +H+ + S ST  +W  GTL++L  C  WS F+ILQS
Sbjct: 152 TFSGALLMTLYKGPIIDLIWSHKTSHNANHS-STDTHWITGTLLILVGCCAWSAFYILQS 210

Query: 37  ITLKEYPAELSL 2
           IT+K YPAELSL
Sbjct: 211 ITIKTYPAELSL 222


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