BLASTX nr result

ID: Coptis21_contig00035249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035249
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis...   111   7e-23
emb|CBI19037.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [...   103   1e-20
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002513792.1| Auxin-induced protein 5NG4, putative [Ricinu...   100   2e-19

>ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 389

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/88 (60%), Positives = 68/88 (77%)
 Frame = +3

Query: 33  MGDQGKYRNLIANFSKVKPYLAMVTLQCGYAGMVILSMLCLNRGLNHNILVVYRNAAATI 212
           MGDQ  +  L   FSKVK YL +V+LQ GYAGM I++M+ L  G+NH +LVVYR+A AT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 213 AVAPFALIFERKIRPKMTISIFIKIMAL 296
            +APFAL+ ERK+RPKMT+S F+KIM L
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVL 88


>emb|CBI19037.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/88 (60%), Positives = 68/88 (77%)
 Frame = +3

Query: 33  MGDQGKYRNLIANFSKVKPYLAMVTLQCGYAGMVILSMLCLNRGLNHNILVVYRNAAATI 212
           MGDQ  +  L   FSKVK YL +V+LQ GYAGM I++M+ L  G+NH +LVVYR+A AT+
Sbjct: 1   MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 213 AVAPFALIFERKIRPKMTISIFIKIMAL 296
            +APFAL+ ERK+RPKMT+S F+KIM L
Sbjct: 61  VIAPFALVLERKVRPKMTLSTFLKIMVL 88


>ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
           gi|302141836|emb|CBI19039.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/88 (57%), Positives = 66/88 (75%)
 Frame = +3

Query: 33  MGDQGKYRNLIANFSKVKPYLAMVTLQCGYAGMVILSMLCLNRGLNHNILVVYRNAAATI 212
           M DQ     +   FS++KPY+ MV LQ G AGM I+SM  LN G++  +L+VYRNA A +
Sbjct: 1   MEDQTSCAKICVVFSRMKPYVLMVALQFGSAGMYIISMATLNHGMSRFVLIVYRNAVAAL 60

Query: 213 AVAPFALIFERKIRPKMTISIFIKIMAL 296
           A+APFAL+ ERKIRPK+TI+IF+KIMAL
Sbjct: 61  AMAPFALLLERKIRPKITIAIFLKIMAL 88


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = +3

Query: 78  KVKPYLAMVTLQCGYAGMVILSMLCLNRGLNHNILVVYRNAAATIAVAPFALIFERKIRP 257
           KVKPYLAMV+LQ GYAGM I++M+ L  G++H IL VYR+  ATI +APFAL+ ERKIRP
Sbjct: 3   KVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKIRP 62

Query: 258 KMTISIFIKIMAL 296
           K+T+ IF++IMAL
Sbjct: 63  KLTLPIFLRIMAL 75


>ref|XP_002513792.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223546878|gb|EEF48375.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 370

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/88 (53%), Positives = 65/88 (73%)
 Frame = +3

Query: 33  MGDQGKYRNLIANFSKVKPYLAMVTLQCGYAGMVILSMLCLNRGLNHNILVVYRNAAATI 212
           M +Q   + L     KVKP++A+V+LQ GYAGM I++M+ L RG++H IL VYR+  AT+
Sbjct: 1   MEEQSLCKKLCQGIIKVKPFIAIVSLQFGYAGMYIITMVSLKRGMSHYILAVYRHVVATL 60

Query: 213 AVAPFALIFERKIRPKMTISIFIKIMAL 296
            +APFAL+ ERK RPKMT+ IF++I AL
Sbjct: 61  VIAPFALVLERKTRPKMTLPIFLRIAAL 88


Top