BLASTX nr result
ID: Coptis21_contig00035243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035243 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera] 92 6e-17 ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 70 1e-10 gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 69 4e-10 emb|CAN80209.1| hypothetical protein VITISV_010568 [Vitis vinifera] 67 1e-09 >emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera] Length = 526 Score = 91.7 bits (226), Expect = 6e-17 Identities = 44/96 (45%), Positives = 68/96 (70%) Frame = -3 Query: 299 ATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAP 120 A HIA+D+ ++EFRR+ SG + I++GN+S +V GI T +++ GRTL LHDVLYAP Sbjct: 135 AXDHIARDQGAYIEFRRISSGTRWIYVGNNSKVEVKGIRTCKLELSKGRTLFLHDVLYAP 194 Query: 119 GVRRSLLSVICLLELGFAVNFNLKAVSISLGSILHG 12 +RR+L+S++ LL LGF + F+ + + LG+ +G Sbjct: 195 DIRRNLVSMLVLLSLGFNLIFHDSIMELYLGTTYYG 230 >ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|222849029|gb|EEE86576.1| predicted protein [Populus trichocarpa] Length = 206 Score = 73.9 bits (180), Expect = 1e-11 Identities = 37/62 (59%), Positives = 46/62 (74%) Frame = -3 Query: 299 ATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAP 120 AT HIA+DR FVEFRR+P G + I++GN++S VLGIGT + + GRTL LHDVL AP Sbjct: 145 ATDHIARDRTTFVEFRRIPKGSKYIYIGNNASTVVLGIGTCKLDLRGGRTLYLHDVLCAP 204 Query: 119 GV 114 V Sbjct: 205 KV 206 >emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] Length = 1842 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/73 (46%), Positives = 51/73 (69%) Frame = -3 Query: 290 HIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAPGVR 111 HIA+DR +VEF ++ SG + I++GN+ +V GI T +++ GRTL LHDVLYA +R Sbjct: 903 HIARDRGAYVEFXKISSGIRXIYVGNNFKVEVKGIRTCELELRRGRTLFLHDVLYASDIR 962 Query: 110 RSLLSVICLLELG 72 +L+ ++ LL LG Sbjct: 963 XNLVXMLILLGLG 975 >gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] Length = 1290 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/100 (33%), Positives = 62/100 (62%) Frame = -3 Query: 302 GATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYA 123 GAT+HI +R F + V G +++++G+S + VLG G +++ +G+TL L+DVL+ Sbjct: 327 GATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHV 386 Query: 122 PGVRRSLLSVICLLELGFAVNFNLKAVSISLGSILHGRAF 3 P +R +L+SV L ++G V+F + I+ ++ G+ + Sbjct: 387 PSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGY 426 >emb|CAN80209.1| hypothetical protein VITISV_010568 [Vitis vinifera] Length = 401 Score = 67.0 bits (162), Expect = 1e-09 Identities = 33/72 (45%), Positives = 49/72 (68%) Frame = -3 Query: 218 GNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAPGVRRSLLSVICLLELGFAVNFNLKAVS 39 GN+ +V GIGT +++ G TL LHDVLYAP +R++L+SV+ LL LGF +NF+ + Sbjct: 269 GNNFKVEVKGIGTCELELRRGCTLFLHDVLYAPDIRQNLVSVLVLLGLGFNLNFHDSVME 328 Query: 38 ISLGSILHGRAF 3 + LG+ +G F Sbjct: 329 LYLGTTYYGSGF 340