BLASTX nr result

ID: Coptis21_contig00035243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035243
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera]    92   6e-17
ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]    70   1e-10
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                69   4e-10
emb|CAN80209.1| hypothetical protein VITISV_010568 [Vitis vinifera]    67   1e-09

>emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera]
          Length = 526

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/96 (45%), Positives = 68/96 (70%)
 Frame = -3

Query: 299 ATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAP 120
           A  HIA+D+  ++EFRR+ SG + I++GN+S  +V GI T  +++  GRTL LHDVLYAP
Sbjct: 135 AXDHIARDQGAYIEFRRISSGTRWIYVGNNSKVEVKGIRTCKLELSKGRTLFLHDVLYAP 194

Query: 119 GVRRSLLSVICLLELGFAVNFNLKAVSISLGSILHG 12
            +RR+L+S++ LL LGF + F+   + + LG+  +G
Sbjct: 195 DIRRNLVSMLVLLSLGFNLIFHDSIMELYLGTTYYG 230


>ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|222849029|gb|EEE86576.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = -3

Query: 299 ATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAP 120
           AT HIA+DR  FVEFRR+P G + I++GN++S  VLGIGT  + +  GRTL LHDVL AP
Sbjct: 145 ATDHIARDRTTFVEFRRIPKGSKYIYIGNNASTVVLGIGTCKLDLRGGRTLYLHDVLCAP 204

Query: 119 GV 114
            V
Sbjct: 205 KV 206


>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
          Length = 1842

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = -3

Query: 290  HIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAPGVR 111
            HIA+DR  +VEF ++ SG + I++GN+   +V GI T  +++  GRTL LHDVLYA  +R
Sbjct: 903  HIARDRGAYVEFXKISSGIRXIYVGNNFKVEVKGIRTCELELRRGRTLFLHDVLYASDIR 962

Query: 110  RSLLSVICLLELG 72
             +L+ ++ LL LG
Sbjct: 963  XNLVXMLILLGLG 975


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/100 (33%), Positives = 62/100 (62%)
 Frame = -3

Query: 302 GATKHIAKDRVGFVEFRRVPSGCQRIFMGNSSSEDVLGIGTY*IQMCTGRTLILHDVLYA 123
           GAT+HI  +R  F  +  V  G +++++G+S +  VLG G   +++ +G+TL L+DVL+ 
Sbjct: 327 GATRHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHV 386

Query: 122 PGVRRSLLSVICLLELGFAVNFNLKAVSISLGSILHGRAF 3
           P +R +L+SV  L ++G  V+F    + I+  ++  G+ +
Sbjct: 387 PSIRVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGY 426


>emb|CAN80209.1| hypothetical protein VITISV_010568 [Vitis vinifera]
          Length = 401

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = -3

Query: 218 GNSSSEDVLGIGTY*IQMCTGRTLILHDVLYAPGVRRSLLSVICLLELGFAVNFNLKAVS 39
           GN+   +V GIGT  +++  G TL LHDVLYAP +R++L+SV+ LL LGF +NF+   + 
Sbjct: 269 GNNFKVEVKGIGTCELELRRGCTLFLHDVLYAPDIRQNLVSVLVLLGLGFNLNFHDSVME 328

Query: 38  ISLGSILHGRAF 3
           + LG+  +G  F
Sbjct: 329 LYLGTTYYGSGF 340


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