BLASTX nr result

ID: Coptis21_contig00035235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035235
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518223.1| receptor protein kinase, putative [Ricinus c...   116   2e-24
ref|XP_002302895.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002321093.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002265846.1| PREDICTED: probably inactive leucine-rich re...    98   6e-19
ref|XP_004156987.1| PREDICTED: LOW QUALITY PROTEIN: probably ina...    95   7e-18

>ref|XP_002518223.1| receptor protein kinase, putative [Ricinus communis]
           gi|223542628|gb|EEF44166.1| receptor protein kinase,
           putative [Ricinus communis]
          Length = 1007

 Score =  116 bits (290), Expect = 2e-24
 Identities = 49/72 (68%), Positives = 63/72 (87%)
 Frame = -3

Query: 281 SIRFLDFSQNSLSGPIPDTMFMNCFSLRFLSFAGNSLEGPIPSTLFKCTSLGTLNLSNNH 102
           ++RFLD S+NSLSGP+PD +F NC SLR++S AGNSL+GP+PSTL +C+SL TLNLS+NH
Sbjct: 147 TVRFLDLSENSLSGPLPDNLFQNCLSLRYISLAGNSLQGPLPSTLARCSSLNTLNLSSNH 206

Query: 101 LSGNPEFSNGIW 66
            SGNP+F +GIW
Sbjct: 207 FSGNPDFFSGIW 218


>ref|XP_002302895.1| predicted protein [Populus trichocarpa] gi|222844621|gb|EEE82168.1|
           predicted protein [Populus trichocarpa]
          Length = 985

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/73 (65%), Positives = 61/73 (83%)
 Frame = -3

Query: 284 NSIRFLDFSQNSLSGPIPDTMFMNCFSLRFLSFAGNSLEGPIPSTLFKCTSLGTLNLSNN 105
           +SI+FLD S+NS SGP+PD +F N  SLR+LS AGN L+GPIPS+L  C+SL T+NLSNN
Sbjct: 126 SSIKFLDLSENSFSGPLPDNLFRNSQSLRYLSLAGNLLQGPIPSSLLSCSSLNTINLSNN 185

Query: 104 HLSGNPEFSNGIW 66
           H SG+P+FS+GIW
Sbjct: 186 HFSGDPDFSSGIW 198


>ref|XP_002321093.1| predicted protein [Populus trichocarpa] gi|222861866|gb|EEE99408.1|
           predicted protein [Populus trichocarpa]
          Length = 1006

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/73 (61%), Positives = 59/73 (80%)
 Frame = -3

Query: 284 NSIRFLDFSQNSLSGPIPDTMFMNCFSLRFLSFAGNSLEGPIPSTLFKCTSLGTLNLSNN 105
           +S++FLD S+NS +GP+PD +F N FSLR+LS AGN L+GPIPS+LF C+SL T+NLSNN
Sbjct: 147 SSLKFLDLSENSFTGPLPDDLFRNSFSLRYLSLAGNLLQGPIPSSLFSCSSLNTINLSNN 206

Query: 104 HLSGNPEFSNGIW 66
             SG+P+F  G W
Sbjct: 207 QFSGDPDFVTGTW 219


>ref|XP_002265846.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At3g28040-like [Vitis vinifera]
          Length = 1012

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/72 (66%), Positives = 55/72 (76%)
 Frame = -3

Query: 281 SIRFLDFSQNSLSGPIPDTMFMNCFSLRFLSFAGNSLEGPIPSTLFKCTSLGTLNLSNNH 102
           SIRFLD S NSL+GPIPD MF N  SLR LS + N LEGPIPS L +CT+L  LNLS+N 
Sbjct: 153 SIRFLDLSHNSLAGPIPDEMFENYSSLRSLSLSMNFLEGPIPSALLRCTTLSNLNLSSNQ 212

Query: 101 LSGNPEFSNGIW 66
            SGN +FS+GIW
Sbjct: 213 FSGNLDFSSGIW 224


>ref|XP_004156987.1| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At3g28040-like
           [Cucumis sativus]
          Length = 1007

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = -3

Query: 284 NSIRFLDFSQNSLSGPIPDTMFMNCFSLRFLSFAGNSLEGPIPSTL-FKCTSLGTLNLSN 108
           +SIRFLDFS N LSGP+PD MF+NC SL +LS A N L+GP+P+TL  +C  L TLNLS 
Sbjct: 148 SSIRFLDFSDNLLSGPLPDEMFVNCSSLHYLSLASNMLQGPVPNTLPTRCLYLNTLNLST 207

Query: 107 NHLSGNPEFSNGIWXXXXXXXXXXXXXXXSGVVP 6
           N  SG+  F+ GIW               SGV+P
Sbjct: 208 NQFSGSLNFAPGIWSLARLRTLDLSKNDFSGVLP 241


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