BLASTX nr result

ID: Coptis21_contig00035234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035234
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...    92   6e-17
emb|CBI33981.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_003566883.1| PREDICTED: uncharacterized protein LOC100842...    85   5e-15
ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [S...    83   2e-14
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]             83   3e-14

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -3

Query: 232 SLLEEFDFQ--GAGGHSHISH-FHGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIE 62
           S+ +E  FQ  G G  S   H  H + TVWDI+P IR +MY HQ EGFEF+WKN+AGGI 
Sbjct: 448 SIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVAGGIY 507

Query: 61  IDKLKNFAPSDGTGGCVISH 2
           +D+LK  + SDG  GC+ISH
Sbjct: 508 LDELKRSSFSDGGSGCIISH 527


>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
 Frame = -3

Query: 232 SLLEEFDFQ--GAGGHSHISH-FHGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIE 62
           S+ +E  FQ  G G  S   H  H + TVWDI+P IR +MY HQ EGFEF+WKN+AGGI 
Sbjct: 23  SIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVAGGIY 82

Query: 61  IDKLKNFAPSDGTGGCVISH 2
           +D+LK  + SDG  GC+ISH
Sbjct: 83  LDELKRSSFSDGGSGCIISH 102


>ref|XP_003566883.1| PREDICTED: uncharacterized protein LOC100842951 [Brachypodium
           distachyon]
          Length = 1077

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
 Frame = -3

Query: 196 GHSHISHF--HGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEIDKLKNFAPSDGT 23
           G+   SHF  H    VWD++P +RE M+PHQ+EGFEF+WK +AGGI+I ++K+   +D T
Sbjct: 476 GYEGTSHFDIHESGLVWDLIPGVREHMFPHQREGFEFMWKKLAGGIDIQQVKHTVNTDST 535

Query: 22  GGCVISH 2
            GCVISH
Sbjct: 536 SGCVISH 542


>ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor]
            gi|241934390|gb|EES07535.1| hypothetical protein
            SORBIDRAFT_04g033300 [Sorghum bicolor]
          Length = 1484

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = -3

Query: 232  SLLEEFDFQGAGGHSHISHFHGKR--TVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEI 59
            S+ E+ D   + GH    +F G +  +VWD++P ++ETM+PHQQ+ FEFLW  +AGG  I
Sbjct: 844  SVFEQNDVLVSNGHELPCNFGGHKAGSVWDLIPGVKETMFPHQQDAFEFLWTKLAGGTTI 903

Query: 58   DKLKNFAPSDGTGGCVISH 2
            ++LK    SD  GGCVISH
Sbjct: 904  EQLKQTVKSDVGGGCVISH 922


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = -3

Query: 160  TVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEIDKLKNFAPSDGTGGCVISH 2
            TVWD +P ++  MYPHQQEGFEF+WKN+AG I +++LK+F  SD TGGC++SH
Sbjct: 866  TVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSH 918


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