BLASTX nr result
ID: Coptis21_contig00035234
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035234 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267... 92 6e-17 emb|CBI33981.3| unnamed protein product [Vitis vinifera] 92 6e-17 ref|XP_003566883.1| PREDICTED: uncharacterized protein LOC100842... 85 5e-15 ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [S... 83 2e-14 gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] 83 3e-14 >ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera] Length = 1070 Score = 91.7 bits (226), Expect = 6e-17 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Frame = -3 Query: 232 SLLEEFDFQ--GAGGHSHISH-FHGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIE 62 S+ +E FQ G G S H H + TVWDI+P IR +MY HQ EGFEF+WKN+AGGI Sbjct: 448 SIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVAGGIY 507 Query: 61 IDKLKNFAPSDGTGGCVISH 2 +D+LK + SDG GC+ISH Sbjct: 508 LDELKRSSFSDGGSGCIISH 527 >emb|CBI33981.3| unnamed protein product [Vitis vinifera] Length = 554 Score = 91.7 bits (226), Expect = 6e-17 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Frame = -3 Query: 232 SLLEEFDFQ--GAGGHSHISH-FHGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIE 62 S+ +E FQ G G S H H + TVWDI+P IR +MY HQ EGFEF+WKN+AGGI Sbjct: 23 SIFDELQFQKPGCGSQSGSDHGLHPEGTVWDIIPGIRNSMYRHQCEGFEFIWKNVAGGIY 82 Query: 61 IDKLKNFAPSDGTGGCVISH 2 +D+LK + SDG GC+ISH Sbjct: 83 LDELKRSSFSDGGSGCIISH 102 >ref|XP_003566883.1| PREDICTED: uncharacterized protein LOC100842951 [Brachypodium distachyon] Length = 1077 Score = 85.1 bits (209), Expect = 5e-15 Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = -3 Query: 196 GHSHISHF--HGKRTVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEIDKLKNFAPSDGT 23 G+ SHF H VWD++P +RE M+PHQ+EGFEF+WK +AGGI+I ++K+ +D T Sbjct: 476 GYEGTSHFDIHESGLVWDLIPGVREHMFPHQREGFEFMWKKLAGGIDIQQVKHTVNTDST 535 Query: 22 GGCVISH 2 GCVISH Sbjct: 536 SGCVISH 542 >ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] gi|241934390|gb|EES07535.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] Length = 1484 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 2/79 (2%) Frame = -3 Query: 232 SLLEEFDFQGAGGHSHISHFHGKR--TVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEI 59 S+ E+ D + GH +F G + +VWD++P ++ETM+PHQQ+ FEFLW +AGG I Sbjct: 844 SVFEQNDVLVSNGHELPCNFGGHKAGSVWDLIPGVKETMFPHQQDAFEFLWTKLAGGTTI 903 Query: 58 DKLKNFAPSDGTGGCVISH 2 ++LK SD GGCVISH Sbjct: 904 EQLKQTVKSDVGGGCVISH 922 >gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] Length = 1465 Score = 82.8 bits (203), Expect = 3e-14 Identities = 33/53 (62%), Positives = 44/53 (83%) Frame = -3 Query: 160 TVWDIVPQIRETMYPHQQEGFEFLWKNIAGGIEIDKLKNFAPSDGTGGCVISH 2 TVWD +P ++ MYPHQQEGFEF+WKN+AG I +++LK+F SD TGGC++SH Sbjct: 866 TVWDKIPGVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSH 918