BLASTX nr result

ID: Coptis21_contig00035213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035213
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39481.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002284169.1| PREDICTED: uncharacterized protein LOC100257...   162   3e-38
emb|CAN77378.1| hypothetical protein VITISV_043863 [Vitis vinifera]   162   3e-38
ref|XP_002512406.1| hypothetical protein RCOM_1432460 [Ricinus c...   144   1e-32
ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arab...   143   1e-32

>emb|CBI39481.3| unnamed protein product [Vitis vinifera]
          Length = 437

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/128 (67%), Positives = 103/128 (80%), Gaps = 7/128 (5%)
 Frame = +3

Query: 6   MRDDDICRHFYGVKDVYGEKFDFKALSNRFDEVLLKMANLQKKLELTVQKMDKEKN---A 176
           + ++DICRHFYG K+ Y E FD KALS R +EVL +M +LQ KLE TVQ+M+K K    A
Sbjct: 44  LHNEDICRHFYGFKEDY-EGFDIKALSARVEEVLAQMESLQNKLESTVQQMEKNKESMTA 102

Query: 177 SISK----KFLEEEVIRPLYSAHISLRQIRIPKLEGVGNATMMEDPLINSFSIEEIRKYI 344
           +ISK    KFLEEEVI+PLYSAHISLRQIR P+ EG+GNAT+ E+PLINSF +EEIRKYI
Sbjct: 103 NISKTEYKKFLEEEVIQPLYSAHISLRQIRFPRAEGIGNATIKEEPLINSFVVEEIRKYI 162

Query: 345 TPKKNRLG 368
           TPK+NRLG
Sbjct: 163 TPKENRLG 170


>ref|XP_002284169.1| PREDICTED: uncharacterized protein LOC100257940 [Vitis vinifera]
          Length = 467

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/128 (67%), Positives = 103/128 (80%), Gaps = 7/128 (5%)
 Frame = +3

Query: 6   MRDDDICRHFYGVKDVYGEKFDFKALSNRFDEVLLKMANLQKKLELTVQKMDKEKN---A 176
           + ++DICRHFYG K+ Y E FD KALS R +EVL +M +LQ KLE TVQ+M+K K    A
Sbjct: 44  LHNEDICRHFYGFKEDY-EGFDIKALSARVEEVLAQMESLQNKLESTVQQMEKNKESMTA 102

Query: 177 SISK----KFLEEEVIRPLYSAHISLRQIRIPKLEGVGNATMMEDPLINSFSIEEIRKYI 344
           +ISK    KFLEEEVI+PLYSAHISLRQIR P+ EG+GNAT+ E+PLINSF +EEIRKYI
Sbjct: 103 NISKTEYKKFLEEEVIQPLYSAHISLRQIRFPRAEGIGNATIKEEPLINSFVVEEIRKYI 162

Query: 345 TPKKNRLG 368
           TPK+NRLG
Sbjct: 163 TPKENRLG 170


>emb|CAN77378.1| hypothetical protein VITISV_043863 [Vitis vinifera]
          Length = 467

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/128 (67%), Positives = 103/128 (80%), Gaps = 7/128 (5%)
 Frame = +3

Query: 6   MRDDDICRHFYGVKDVYGEKFDFKALSNRFDEVLLKMANLQKKLELTVQKMDKEKN---A 176
           + ++DICRHFYG K+ Y E FD KALS R +EVL +M +LQ KLE TVQ+M+K K    A
Sbjct: 44  LHNEDICRHFYGFKEDY-EGFDIKALSARVEEVLAQMESLQNKLESTVQQMEKNKESMTA 102

Query: 177 SISK----KFLEEEVIRPLYSAHISLRQIRIPKLEGVGNATMMEDPLINSFSIEEIRKYI 344
           +ISK    KFLEEEVI+PLYSAHISLRQIR P+ EG+GNAT+ E+PLINSF +EEIRKYI
Sbjct: 103 NISKTEYKKFLEEEVIQPLYSAHISLRQIRFPRAEGIGNATIKEEPLINSFVVEEIRKYI 162

Query: 345 TPKKNRLG 368
           TPK+NRLG
Sbjct: 163 TPKENRLG 170


>ref|XP_002512406.1| hypothetical protein RCOM_1432460 [Ricinus communis]
           gi|223548367|gb|EEF49858.1| hypothetical protein
           RCOM_1432460 [Ricinus communis]
          Length = 165

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/129 (57%), Positives = 100/129 (77%), Gaps = 8/129 (6%)
 Frame = +3

Query: 6   MRDDDICRHFYGVKDVYGEKFDFKALSNRFDEVLLKMANLQKKLELTVQKMDKEKNASIS 185
           +R+++IC HFYGV DVY E+FD +AL++R  EVL +M  LQ+KLEL+VQ+M+K K+    
Sbjct: 30  LRNEEICNHFYGVNDVY-ERFDVRALTDRIGEVLDRMEKLQEKLELSVQEMEKHKDVLDK 88

Query: 186 --------KKFLEEEVIRPLYSAHISLRQIRIPKLEGVGNATMMEDPLINSFSIEEIRKY 341
                   K++LE+EVIRPLYSAH++LRQIR+P++    N+T  EDPLIN+F IEEIRKY
Sbjct: 89  TNITRLEHKRYLEQEVIRPLYSAHLALRQIRLPRIT---NSTTEEDPLINTFIIEEIRKY 145

Query: 342 ITPKKNRLG 368
           ITPK+NR+G
Sbjct: 146 ITPKENRIG 154


>ref|XP_002884510.1| hypothetical protein ARALYDRAFT_477828 [Arabidopsis lyrata subsp.
           lyrata] gi|297330350|gb|EFH60769.1| hypothetical protein
           ARALYDRAFT_477828 [Arabidopsis lyrata subsp. lyrata]
          Length = 463

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 2/123 (1%)
 Frame = +3

Query: 6   MRDDDICRHFYGVKDVYGEKFDFKALSNRFDEVLLKMANLQKKLELTVQKMDKEKNASIS 185
           + ++D+C + Y +K+V  E FD KAL +R DEVL KM NL +KLE TV++M+K K+ S  
Sbjct: 44  LHNEDVCNNIYTIKEVSNEGFDIKALHDRVDEVLEKMDNLYEKLEKTVKEMEKSKDGSKK 103

Query: 186 --KKFLEEEVIRPLYSAHISLRQIRIPKLEGVGNATMMEDPLINSFSIEEIRKYITPKKN 359
             KKFLE+EV++P Y AHI LRQIR+PK EG+ N+T  E+PLIN F IEEIR+YITPK+N
Sbjct: 104 EMKKFLEDEVMKPFYYAHIGLRQIRLPKPEGIRNSTEKEEPLINKFLIEEIRQYITPKEN 163

Query: 360 RLG 368
           R+G
Sbjct: 164 RVG 166


Top