BLASTX nr result

ID: Coptis21_contig00035212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035212
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323453.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
emb|CBI32691.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002279291.1| PREDICTED: interactor of constitutive active...    79   4e-13
emb|CAC84774.1| P70 protein [Nicotiana tabacum]                        76   3e-12
ref|XP_003520644.1| PREDICTED: interactor of constitutive active...    75   6e-12

>ref|XP_002323453.1| predicted protein [Populus trichocarpa] gi|222868083|gb|EEF05214.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/56 (73%), Positives = 43/56 (76%)
 Frame = +1

Query: 154 MQTPKARCGTLEVPQKTSPATPRTARQLKATGSEAGSTSSQPTSRTPKDRSPKVAE 321
           MQTPKA+  +LEVPQK SPATPRT RQLK  GSE  S S  P SRTPKDRSPKV E
Sbjct: 1   MQTPKAKTSSLEVPQKKSPATPRT-RQLKTPGSENNSVSPNPASRTPKDRSPKVTE 55


>emb|CBI32691.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
 Frame = +1

Query: 154 MQTPKARCGTLEVPQKTSPATPRTARQLKATGSEAGSTSS-QPTSRTPKDRSPKVAE 321
           MQTPK R G+LEVP +TSPATPRTAR+LK  GS+  S SS  P SRTPKDRSPK+ +
Sbjct: 1   MQTPKRRTGSLEVPPRTSPATPRTARKLKTPGSDGDSVSSPHPASRTPKDRSPKIVK 57


>ref|XP_002279291.1| PREDICTED: interactor of constitutive active ROPs 2,
           chloroplastic-like [Vitis vinifera]
          Length = 621

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
 Frame = +1

Query: 154 MQTPKARCGTLEVPQKTSPATPRTARQLKATGSEAGSTSS-QPTSRTPKDRSPKVAE 321
           MQTPK R G+LEVP +TSPATPRTAR+LK  GS+  S SS  P SRTPKDRSPK+ +
Sbjct: 1   MQTPKRRTGSLEVPPRTSPATPRTARKLKTPGSDGDSVSSPHPASRTPKDRSPKIVK 57


>emb|CAC84774.1| P70 protein [Nicotiana tabacum]
          Length = 601

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/55 (69%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +1

Query: 154 MQTPKARCGTLEVPQKTSPATPRTARQLKATGSEAGSTSS-QPTSRTPKDRSPKV 315
           MQTPKAR  ++EVPQ+TSPATP+T R+LK  GS+A S SS  P +RTPKDRSPKV
Sbjct: 1   MQTPKARTVSVEVPQRTSPATPKTTRKLKTPGSDADSVSSPNPATRTPKDRSPKV 55


>ref|XP_003520644.1| PREDICTED: interactor of constitutive active ROPs 2,
           chloroplastic-like [Glycine max]
          Length = 621

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/57 (70%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +1

Query: 154 MQTPKARCGTLEVPQKTSPATPRTARQLKATGSEAGSTSS-QPTSRTPKDRSPKVAE 321
           MQTPKAR G  EVPQK SPATPRTARQLK   S+A S SS     +TPKDRSPKV E
Sbjct: 1   MQTPKARVGASEVPQKKSPATPRTARQLKTPNSDAYSVSSPNAAKKTPKDRSPKVIE 57


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