BLASTX nr result

ID: Coptis21_contig00035167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035167
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510143.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_003544477.1| PREDICTED: uncharacterized protein LOC100790...    65   4e-09
gb|ABD33288.1| hypothetical protein MtrDRAFT_AC158501g25v2 [Medi...    58   9e-07
ref|XP_003589124.1| hypothetical protein MTR_1g018740 [Medicago ...    58   9e-07

>ref|XP_002510143.1| conserved hypothetical protein [Ricinus communis]
           gi|223550844|gb|EEF52330.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 3/62 (4%)
 Frame = -3

Query: 211 RALRSTGTS---NGCEQEGGAENSVGIASFLVSSNNTTSYASSVRSLAFKLASGPSKKGP 41
           RALRST T+   + C+QE GAE++ G+ASF VSSNN ++ ASSVRSL ++LASGPSKKGP
Sbjct: 98  RALRSTTTTVIADNCQQENGAESASGVASFSVSSNNAST-ASSVRSLMYQLASGPSKKGP 156

Query: 40  GH 35
           GH
Sbjct: 157 GH 158


>ref|XP_003544477.1| PREDICTED: uncharacterized protein LOC100790635 [Glycine max]
          Length = 90

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
 Frame = -3

Query: 214 GRALRS----TGTSNGCEQEGGAENSVGIASFLVSSNNTTSYASSVRSLAFKLASGPSKK 47
           GR LRS    T   +GCE   G ++S+G+A+F V+SNN+++     RSLA+KLASGPSKK
Sbjct: 28  GRVLRSEVLKTPVGDGCEDFKGEDSSLGMATFAVASNNSST-RQFARSLAYKLASGPSKK 86

Query: 46  GPGH 35
           GPGH
Sbjct: 87  GPGH 90


>gb|ABD33288.1| hypothetical protein MtrDRAFT_AC158501g25v2 [Medicago truncatula]
          Length = 86

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -3

Query: 214 GRALRSTGTS----NGCEQEGGAENSVGIASFLVSSNNTTSYASSVRSLAFKLASGPSKK 47
           GR LR    +    +GCE  G  E SVG+ +F VSSNN+ S+  S RSLAF+L SGPSK+
Sbjct: 26  GRVLRPEAQNAQIGDGCE--GTTEGSVGMTTFSVSSNNS-SFHDSARSLAFRLTSGPSKR 82

Query: 46  GPGH 35
           G GH
Sbjct: 83  GKGH 86


>ref|XP_003589124.1| hypothetical protein MTR_1g018740 [Medicago truncatula]
           gi|355478172|gb|AES59375.1| hypothetical protein
           MTR_1g018740 [Medicago truncatula]
          Length = 84

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -3

Query: 214 GRALRSTGTS----NGCEQEGGAENSVGIASFLVSSNNTTSYASSVRSLAFKLASGPSKK 47
           GR LR    +    +GCE  G  E SVG+ +F VSSNN+ S+  S RSLAF+L SGPSK+
Sbjct: 24  GRVLRPEAQNAQIGDGCE--GTTEGSVGMTTFSVSSNNS-SFHDSARSLAFRLTSGPSKR 80

Query: 46  GPGH 35
           G GH
Sbjct: 81  GKGH 84