BLASTX nr result

ID: Coptis21_contig00035159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035159
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306254.1| white-brown-complex ABC transporter family [...   184   7e-45
emb|CBI21607.3| unnamed protein product [Vitis vinifera]              184   9e-45
ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5...   184   9e-45
ref|XP_002309921.1| white-brown-complex ABC transporter family [...   179   2e-43
ref|XP_002516304.1| ATP-binding cassette transporter, putative [...   176   2e-42

>ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855703|gb|EEE93250.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 643

 Score =  184 bits (467), Expect = 7e-45
 Identities = 92/104 (88%), Positives = 99/104 (95%)
 Frame = -3

Query: 314 NSRISETIILTHRFSKNIFRTKELFACRTIQMLIVGLVLGSIFYDLKEDLIGSAERVGLF 135
           NSR+ ET+ILTHRFSKNIFRTKELFACRTIQMLI GLVLGSIFY+L++DLIG+ ERVGLF
Sbjct: 359 NSRLQETLILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFYNLEDDLIGAEERVGLF 418

Query: 134 AFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANG 3
           AFILTFLLSCTTEALPIFLQEREILMKETS GSYR+SSY IANG
Sbjct: 419 AFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANG 462


>emb|CBI21607.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  184 bits (466), Expect = 9e-45
 Identities = 92/104 (88%), Positives = 98/104 (94%)
 Frame = -3

Query: 314 NSRISETIILTHRFSKNIFRTKELFACRTIQMLIVGLVLGSIFYDLKEDLIGSAERVGLF 135
           NSR  ETIILTHRFSKNIFRTKELFACRT+QMLI GLVLGSIFY LK++LIG+ ERVGLF
Sbjct: 263 NSRFRETIILTHRFSKNIFRTKELFACRTLQMLIAGLVLGSIFYQLKDNLIGAEERVGLF 322

Query: 134 AFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANG 3
           AFILTFLLSCTTEALPIFLQER+ILMKETSSGSYR+SSY IANG
Sbjct: 323 AFILTFLLSCTTEALPIFLQERDILMKETSSGSYRVSSYAIANG 366


>ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5 isoform 1 [Vitis
           vinifera]
          Length = 635

 Score =  184 bits (466), Expect = 9e-45
 Identities = 92/104 (88%), Positives = 98/104 (94%)
 Frame = -3

Query: 314 NSRISETIILTHRFSKNIFRTKELFACRTIQMLIVGLVLGSIFYDLKEDLIGSAERVGLF 135
           NSR  ETIILTHRFSKNIFRTKELFACRT+QMLI GLVLGSIFY LK++LIG+ ERVGLF
Sbjct: 353 NSRFRETIILTHRFSKNIFRTKELFACRTLQMLIAGLVLGSIFYQLKDNLIGAEERVGLF 412

Query: 134 AFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANG 3
           AFILTFLLSCTTEALPIFLQER+ILMKETSSGSYR+SSY IANG
Sbjct: 413 AFILTFLLSCTTEALPIFLQERDILMKETSSGSYRVSSYAIANG 456


>ref|XP_002309921.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222852824|gb|EEE90371.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 546

 Score =  179 bits (454), Expect = 2e-43
 Identities = 89/104 (85%), Positives = 97/104 (93%)
 Frame = -3

Query: 314 NSRISETIILTHRFSKNIFRTKELFACRTIQMLIVGLVLGSIFYDLKEDLIGSAERVGLF 135
           + ++ ET+ILTHRFSKNIFRTKELFACRTIQMLI GLVLGSIFY+LK+DL G+ ERVGLF
Sbjct: 275 SGKLQETLILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFYNLKDDLTGAEERVGLF 334

Query: 134 AFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANG 3
           AFILTFLLSCTTEALPIFLQEREILMKETS GSYR+SSY IANG
Sbjct: 335 AFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANG 378


>ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544534|gb|EEF46051.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 600

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/104 (83%), Positives = 96/104 (92%)
 Frame = -3

Query: 314 NSRISETIILTHRFSKNIFRTKELFACRTIQMLIVGLVLGSIFYDLKEDLIGSAERVGLF 135
           NSR+ E +ILTHRFSKNIFRTKELFACRTIQMLI G+VLGSIF ++K+D+ G+ ERVGLF
Sbjct: 349 NSRLQEIVILTHRFSKNIFRTKELFACRTIQMLICGIVLGSIFCNVKDDIAGAEERVGLF 408

Query: 134 AFILTFLLSCTTEALPIFLQEREILMKETSSGSYRISSYVIANG 3
           AFILTFLLSCTTEALPIFLQEREILMKETS GSYR+SSY IANG
Sbjct: 409 AFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANG 452


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