BLASTX nr result

ID: Coptis21_contig00035158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035158
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrol...   275   5e-72
ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|2...   275   8e-72
ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|2...   273   3e-71
ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263...   261   9e-68
emb|CBI26140.3| unnamed protein product [Vitis vinifera]              261   9e-68

>ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
            communis] gi|223543923|gb|EEF45449.1| inosine-uridine
            preferring nucleoside hydrolase, putative [Ricinus
            communis]
          Length = 885

 Score =  275 bits (704), Expect = 5e-72
 Identities = 140/229 (61%), Positives = 179/229 (78%), Gaps = 2/229 (0%)
 Frame = -3

Query: 683  ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFTVPSNKYAELNMFLD 504
            ILTNGPL++LA+IILS+ N SSVI+ VYVVGGHI++++ D+GNV T  SN+Y E+N++LD
Sbjct: 660  ILTNGPLTSLAEIILSDNNASSVIKDVYVVGGHISHNNLDKGNVLTSHSNEYTEMNIYLD 719

Query: 503  PLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKT 324
            PLAAKTV ES LDITLIPL  QRK SSF ++++SL    KTPEA+FAR+LLSRLYRL + 
Sbjct: 720  PLAAKTVFESSLDITLIPLEAQRKVSSFSKILQSLSKTNKTPEALFARRLLSRLYRLHQA 779

Query: 323  HHRYHHMDIFLGEILGAVMLGGDYE--LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRA 150
            HHRYHHMD FLGEILGAV LGG ++  L    ++K + VLA G    +G+I +DE+ G+ 
Sbjct: 780  HHRYHHMDTFLGEILGAVSLGGGHDSLLNSILKIKRIKVLAEGVESREGEIVVDEKQGKL 839

Query: 149  VKIIESVNPMAYYGHFAELFGSKVQSAVIGSFDEQKRIWSMPPTRTNSK 3
            V++++SV+P  YY HFA   G K+QSAVIGSFDEQ+RIWS   T+ NSK
Sbjct: 840  VRLLDSVDPTVYYNHFAWQLGVKMQSAVIGSFDEQRRIWS---TKPNSK 885



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
 Frame = -3

Query: 671 GPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDK------------------DEGNVFT 546
           G  +N A  ++   ++   ++H+YV+GG + + +                   D GN+F+
Sbjct: 190 GAHTNFAIFLMKNPHLKKNVKHIYVMGGGVRSQNPTGCCPRNTRLSCHPRQCGDNGNLFS 249

Query: 545 -VPSNKYAELNMFLDPLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAM 369
              SN YAE N+F DP AA  V+ SG+ +TL+PL+             + +    T EA 
Sbjct: 250 DYTSNPYAEFNIFGDPFAAYQVIHSGIPVTLVPLDATNTIPISENFFNTFELNQHTYEAQ 309

Query: 368 FARQLL 351
           +  Q L
Sbjct: 310 YCFQSL 315


>ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  275 bits (702), Expect = 8e-72
 Identities = 142/228 (62%), Positives = 176/228 (77%), Gaps = 1/228 (0%)
 Frame = -3

Query: 683  ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFTVPSNKYAELNMFLD 504
            ILTNGPL++LA+II +E N SSVI+ VYVVGGHI++ D D+GNV T+ SN+Y ELNMFLD
Sbjct: 640  ILTNGPLTSLAKIIQNENNTSSVIQDVYVVGGHISHSDTDKGNVLTIDSNEYTELNMFLD 699

Query: 503  PLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKT 324
            PLAAKTV ES LDITLIPL +QR+ SSFP+++E L+    TPEA+FA++LLSRLY L++T
Sbjct: 700  PLAAKTVFESSLDITLIPLGVQRRVSSFPEILERLRKINTTPEALFAQRLLSRLYHLKET 759

Query: 323  HHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAV 147
            H RY  MD FLGEILGAV+L G++ +L P+ +VKP+ VLA G    DG+I IDE+ GR V
Sbjct: 760  HRRYQQMDTFLGEILGAVVLAGNFSKLDPTFRVKPIKVLAEGVESEDGRIVIDEKQGRLV 819

Query: 146  KIIESVNPMAYYGHFAELFGSKVQSAVIGSFDEQKRIWSMPPTRTNSK 3
            KI+E V+  AYY  F E   SK QSAVIGSFDEQ+R WS+P   T  K
Sbjct: 820  KIVEKVDLGAYYDLFTEQLRSKEQSAVIGSFDEQRRNWSVPLNLTKGK 867



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
 Frame = -3

Query: 683 ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFT-VPSNKYAELNMFL 507
           +L  G  +N+   +++  ++ + IEH+YV+GG + +D    GN+F  + SN YAE N+F 
Sbjct: 188 VLITGAHTNIGVFLMNNPHLKNNIEHIYVMGGAVRSD----GNLFADLYSNPYAEFNIFA 243

Query: 506 DPLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQK 327
           DP AA  VL SG+ +TL+PL+      +     ++ +    T EA +  + L      + 
Sbjct: 244 DPFAAYQVLHSGIPLTLVPLDATNTIPTNENFFKAFEQNQHTYEAQYCFRSLKMTRDTRT 303

Query: 326 THHRY--HHM-DIFLGEILGAVM 267
             H Y  H+M D F   +  + M
Sbjct: 304 DDHFYTSHYMWDTFAAGVAVSTM 326


>ref|XP_002311814.1| predicted protein [Populus trichocarpa] gi|222851634|gb|EEE89181.1|
            predicted protein [Populus trichocarpa]
          Length = 921

 Score =  273 bits (697), Expect = 3e-71
 Identities = 140/221 (63%), Positives = 174/221 (78%), Gaps = 1/221 (0%)
 Frame = -3

Query: 683  ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFTVPSNKYAELNMFLD 504
            ILTNGPL++LA+II +E N SSVI+ VYVVGGHI++ D D+GNV T+ SN+Y ELNMFLD
Sbjct: 693  ILTNGPLTSLAKIIQNENNTSSVIQDVYVVGGHISHSDTDKGNVLTIDSNEYTELNMFLD 752

Query: 503  PLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKT 324
            PLAAKTV ES LDITLIPL +QR+ SSFP+++E L+    TPEA+FA++LLSRLY L++T
Sbjct: 753  PLAAKTVFESSLDITLIPLGVQRRVSSFPEILERLRKINTTPEALFAQRLLSRLYHLKET 812

Query: 323  HHRYHHMDIFLGEILGAVMLGGDY-ELKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAV 147
            H RY  MD FLGEILGAV+L G++ +L P+ +VKP+ VLA G    DG+I IDE+ GR V
Sbjct: 813  HRRYQQMDTFLGEILGAVVLAGNFSKLDPTFRVKPIKVLAEGVESEDGRIVIDEKQGRLV 872

Query: 146  KIIESVNPMAYYGHFAELFGSKVQSAVIGSFDEQKRIWSMP 24
            KI+E V+  AYY  F E   SK QSAVIGSFDEQ+R WS+P
Sbjct: 873  KIVEKVDLGAYYDLFTEQLRSKEQSAVIGSFDEQRRNWSVP 913


>ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
          Length = 1054

 Score =  261 bits (667), Expect = 9e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
 Frame = -3

Query: 683  ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFTVPSNKYAELNMFLD 504
            ILTNGPL+ LA IILS KN +S+I+ VYVVGGHI++    +GNVF+VP N++AELN++LD
Sbjct: 826  ILTNGPLTTLANIILSRKNTTSLIQDVYVVGGHISHGGTMKGNVFSVPLNEHAELNLYLD 885

Query: 503  PLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKT 324
            P AAKTV ES LDI LIPL  QR+ SSFP++IE L    KTPEA+FAR+LLS L+ LQ+ 
Sbjct: 886  PFAAKTVFESDLDIKLIPLRAQRRVSSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEK 945

Query: 323  HHRYHHMDIFLGEILGAVMLGGDYE-LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAV 147
            HHRY HM  FLGEILGAV+L  D+  L  + + KP+ + ATG+   DGQ+ IDE+ G+ V
Sbjct: 946  HHRYRHMHTFLGEILGAVVLADDHSFLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLV 1005

Query: 146  KIIESVNPMAYYGHFAELFGSKVQSAVIGSFDEQKRIWSMPPTRTNS 6
            K++  VNP AYY   A   G K QSAVI SF+EQKRIW+ PP RT +
Sbjct: 1006 KLLRRVNPKAYYDLLANRLGDKKQSAVIASFEEQKRIWTTPPNRTET 1052



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
 Frame = -3

Query: 671 GPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDK------------------DEGNVFT 546
           G  +N A  +++  ++   I+H+YV+GG + + +                   D GN+FT
Sbjct: 355 GGHTNFAIFLMNNPHLKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFT 414

Query: 545 -VPSNKYAELNMFLDPLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAM 369
              SN YAE N+F DP AA  VL SG+ +TL+PL+         +  ++     KT EA 
Sbjct: 415 GYTSNPYAEFNIFGDPFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQ 474

Query: 368 F 366
           +
Sbjct: 475 Y 475


>emb|CBI26140.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  261 bits (667), Expect = 9e-68
 Identities = 134/227 (59%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
 Frame = -3

Query: 683  ILTNGPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDKDEGNVFTVPSNKYAELNMFLD 504
            ILTNGPL+ LA IILS KN +S+I+ VYVVGGHI++    +GNVF+VP N++AELN++LD
Sbjct: 665  ILTNGPLTTLANIILSRKNTTSLIQDVYVVGGHISHGGTMKGNVFSVPLNEHAELNLYLD 724

Query: 503  PLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKT 324
            P AAKTV ES LDI LIPL  QR+ SSFP++IE L    KTPEA+FAR+LLS L+ LQ+ 
Sbjct: 725  PFAAKTVFESDLDIKLIPLRAQRRVSSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEK 784

Query: 323  HHRYHHMDIFLGEILGAVMLGGDYE-LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAV 147
            HHRY HM  FLGEILGAV+L  D+  L  + + KP+ + ATG+   DGQ+ IDE+ G+ V
Sbjct: 785  HHRYRHMHTFLGEILGAVVLADDHSFLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLV 844

Query: 146  KIIESVNPMAYYGHFAELFGSKVQSAVIGSFDEQKRIWSMPPTRTNS 6
            K++  VNP AYY   A   G K QSAVI SF+EQKRIW+ PP RT +
Sbjct: 845  KLLRRVNPKAYYDLLANRLGDKKQSAVIASFEEQKRIWTTPPNRTET 891



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
 Frame = -3

Query: 671 GPLSNLAQIILSEKNVSSVIEHVYVVGGHINNDDK------------------DEGNVFT 546
           G  +N A  +++  ++   I+H+YV+GG + + +                   D GN+FT
Sbjct: 194 GGHTNFAIFLMNNPHLKKNIKHIYVMGGGVRSKNPTGCCPKNASSTCKPRQCGDPGNLFT 253

Query: 545 -VPSNKYAELNMFLDPLAAKTVLESGLDITLIPLNIQRKTSSFPQMIESLKFKGKTPEAM 369
              SN YAE N+F DP AA  VL SG+ +TL+PL+         +  ++     KT EA 
Sbjct: 254 GYTSNPYAEFNIFGDPFAAYLVLHSGIPLTLVPLDATNTIPIDEEFFDAFDQNQKTYEAQ 313

Query: 368 F 366
           +
Sbjct: 314 Y 314


Top