BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035126
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
emb|CBI20254.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/107 (65%), Positives = 85/107 (79%)
 Frame = +2

Query: 2   SSLGFGESVQCHIWKNGFGSHVFVQTGLIDFYSNLNKIVECVKVFEEMPDRDVFAWTTML 181
           S L F E+V  H+W+NGF SHVFVQT L+DFYS++ +I E V+VF+EMP+RDVFAWTTM+
Sbjct: 94  SQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMV 153

Query: 182 SSYVRAGDMGSAQRLFEAMPDRNVATWNTMIAGYAKLGNVDGATALF 322
           S  VR GDM SA RLF+ MPDRN+ATWNT+I GYA+L  VD A  LF
Sbjct: 154 SGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLF 200


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   SSLGFGESVQCHIWKNGFGSHVFVQTGLIDFYSNLNKIVECVKVFEEMPDRDVFAWTTML 181
           S LGFGE+V  HIWK GF SHVFVQT L+DFY N  KIVE  +VF+EM +RDVFAWTTM+
Sbjct: 24  SELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMI 83

Query: 182 SSYVRAGDMGSAQRLFEAMPDRNVATWNTMIAGYAKLGNVDGATALF 322
           S + R GDM SA++LF+ MP RN A+WN MI GY++L NV+ A  LF
Sbjct: 84  SVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLF 130


>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   SSLGFGESVQCHIWKNGFGSHVFVQTGLIDFYSNLNKIVECVKVFEEMPDRDVFAWTTML 181
           S LGFGE+V  HIWK GF SHVFVQT L+DFY N  KIVE  +VF+EM +RDVFAWTTM+
Sbjct: 124 SELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMI 183

Query: 182 SSYVRAGDMGSAQRLFEAMPDRNVATWNTMIAGYAKLGNVDGATALF 322
           S + R GDM SA++LF+ MP RN A+WN MI GY++L NV+ A  LF
Sbjct: 184 SVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLF 230



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 46/80 (57%)
 Frame = +2

Query: 83  LIDFYSNLNKIVECVKVFEEMPDRDVFAWTTMLSSYVRAGDMGSAQRLFEAMPDRNVATW 262
           +ID YS L  +     +F +MP+RD+ +WTTM++ Y +   +  +  +F  +  +N+  W
Sbjct: 213 MIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKHLDKSLVVFFKLRKKNLFCW 272

Query: 263 NTMIAGYAKLGNVDGATALF 322
           N++I G A  G  + A A+F
Sbjct: 273 NSIIEGLAVHGYAEEALAMF 292


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/102 (63%), Positives = 78/102 (76%)
 Frame = +2

Query: 17  GESVQCHIWKNGFGSHVFVQTGLIDFYSNLNKIVECVKVFEEMPDRDVFAWTTMLSSYVR 196
           G+ V CHIWK GF SH+FVQT L+DFYS L  + E  KVF+EM +RD FAWT M+S+  R
Sbjct: 254 GQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALAR 313

Query: 197 AGDMGSAQRLFEAMPDRNVATWNTMIAGYAKLGNVDGATALF 322
            GDM SA++LFE MP+RN ATWNTMI GYA+LGNV+ A  LF
Sbjct: 314 VGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLF 355


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/102 (63%), Positives = 77/102 (75%)
 Frame = +2

Query: 17  GESVQCHIWKNGFGSHVFVQTGLIDFYSNLNKIVECVKVFEEMPDRDVFAWTTMLSSYVR 196
           G+ V CHIWK GF SH+FVQT L+DFYS L  + E  KVF+EM +RD FAWT MLS+  R
Sbjct: 157 GQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALAR 216

Query: 197 AGDMGSAQRLFEAMPDRNVATWNTMIAGYAKLGNVDGATALF 322
            GDM SA++LFE MP+RN ATWNTMI GY +LGNV+ A  LF
Sbjct: 217 VGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLF 258