BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035124
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   106   2e-21
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              104   7e-21
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   104   7e-21

>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/97 (57%), Positives = 76/97 (78%)
 Frame = -3

Query: 292 PTTHLLQKFSTPFELKQIHTHILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVNN 113
           P+THLL  F++PFELKQ+H H+LKTN PLS+LPL+RVAS+CA + ++F YA  IF+ ++ 
Sbjct: 17  PSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDA 75

Query: 112 TSVNVIWNNCLKAFAEGESPIDALRLFYWLRYFNIMP 2
           + V   WN CL++FAEG+SP DA+ LFY LR F+I P
Sbjct: 76  SEV-THWNTCLRSFAEGDSPADAISLFYRLREFDISP 111


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/97 (57%), Positives = 76/97 (78%)
 Frame = -3

Query: 292 PTTHLLQKFSTPFELKQIHTHILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVNN 113
           P+THLL  F++PFELKQ+H H+LKTN PLS+LPL+RVAS+CA + ++F YA  IF+ ++ 
Sbjct: 17  PSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFN-SSFSYAKLIFQLLDA 75

Query: 112 TSVNVIWNNCLKAFAEGESPIDALRLFYWLRYFNIMP 2
           + V   WN CL++FAEG+SP DA+ LFY LR F+I P
Sbjct: 76  SEV-THWNTCLRSFAEGDSPADAISLFYRLREFDISP 111


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 LLQKFSTPFELKQIHTHILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVNNTSVN 101
           LL+ F++PFEL+Q+H  I+KTN PLS LPL RV  +CA +P +F YA  IFE V      
Sbjct: 34  LLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTP-SFHYAQQIFECVEKQKPE 92

Query: 100 V-IWNNCLKAFAEGESPIDALRLFYWLRYFNIMP 2
             +WN+CLKA AEG+SPIDA+ LFY LR +++ P
Sbjct: 93  TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCP 126


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 LLQKFSTPFELKQIHTHILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVNNTSVN 101
           LL+ F++PFEL+Q+H  I+KTN PLS LPL RV  +CA +P +F YA  IF+ V      
Sbjct: 67  LLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTP-SFHYAQQIFKCVEKQKPE 125

Query: 100 V-IWNNCLKAFAEGESPIDALRLFYWLRYFNIMP 2
             +WN+CLKA AEG+SPIDA+ LFY LR +++ P
Sbjct: 126 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCP 159


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
 Frame = -3

Query: 280 LLQKFSTPFELKQIHTHILKTNKPLSTLPLNRVASICALSPTNFPYAHSIFERVNNTSVN 101
           LL+ F++PFEL+Q+H  I+KTN PLS LPL RV  +CA +P +F YA  IF+ V      
Sbjct: 34  LLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTP-SFHYAQQIFKCVEKQKPE 92

Query: 100 V-IWNNCLKAFAEGESPIDALRLFYWLRYFNIMP 2
             +WN+CLKA AEG+SPIDA+ LFY LR +++ P
Sbjct: 93  TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCP 126