BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035106
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   100   1e-19
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   100   1e-19
emb|CBI36352.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...    99   4e-19
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/80 (56%), Positives = 59/80 (73%)
 Frame = +3

Query: 45  LLSAIDNCKSMNQLKQIHSQMIRKGDIKNPVEQARILRFCCVHEMGDMDYARILFHQILQ 224
           L+S ++ C+SM+QL+Q+H Q I+KG   NPV Q R++ FCC HE GD  YAR LF +I +
Sbjct: 42  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101

Query: 225 PNVVIWNTMIRGYSRRKAPR 284
           PN+ IWNTMIRGYSR   P+
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQ 121


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  100 bits (250), Expect = 1e-19
 Identities = 45/80 (56%), Positives = 59/80 (73%)
 Frame = +3

Query: 45  LLSAIDNCKSMNQLKQIHSQMIRKGDIKNPVEQARILRFCCVHEMGDMDYARILFHQILQ 224
           L+S ++ C+SM+QL+Q+H Q I+KG   NPV Q R++ FCC HE GD  YAR LF +I +
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80

Query: 225 PNVVIWNTMIRGYSRRKAPR 284
           PN+ IWNTMIRGYSR   P+
Sbjct: 81  PNLFIWNTMIRGYSRLDFPQ 100


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
 Frame = +3

Query: 18  TYVP-ISQSLLLSAIDNCKSMNQLKQIHSQMIRKGDIKNPVEQARILRFCCVHEMGDMDY 194
           T++P + Q+  LS I  CKSM QLKQIHSQ I  G I NP+  A+I+ FCC HE+GDM+Y
Sbjct: 12  THLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEY 71

Query: 195 ARILFHQILQPNVVIWNTMIRGYSRRKAPRDA 290
           AR++F  +  PN  +WN MI+GYSR   P  A
Sbjct: 72  ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSA 103


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
 Frame = +3

Query: 18  TYVP-ISQSLLLSAIDNCKSMNQLKQIHSQMIRKGDIKNPVEQARILRFCCVHEMGDMDY 194
           T++P + Q+  LS I  CKSM QLKQIHSQ I  G I NP+  A+I+ FCC HE+GDM+Y
Sbjct: 12  THLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEY 71

Query: 195 ARILFHQILQPNVVIWNTMIRGYSRRKAPRDA 290
           AR++F  +  PN  +WN MI+GYSR   P  A
Sbjct: 72  ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSA 103


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = +3

Query: 27  PISQSLLLSAIDNCKSMNQLKQIHSQMIRKGDIKNPVEQARILRFCCVHEMGDMDYARIL 206
           P++++  LS  + CKSM  LKQIHS+ I+ G I NP+ Q +IL FCC  E GDM YAR L
Sbjct: 11  PVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQL 70

Query: 207 FHQILQPNVVIWNTMIRGYSRRKAPR 284
           F  I +P+V  WN M +GYSR   P+
Sbjct: 71  FDTIPEPSVFSWNIMFKGYSRIACPK 96