BLASTX nr result

ID: Coptis21_contig00035088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035088
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163437.1| PREDICTED: LOW QUALITY PROTEIN: allantoinase...   264   9e-69
ref|XP_004146596.1| PREDICTED: allantoinase-like [Cucumis sativus]    264   9e-69
ref|XP_002874824.1| hypothetical protein ARALYDRAFT_490140 [Arab...   263   1e-68
ref|XP_002519047.1| allantoinase, putative [Ricinus communis] gi...   261   6e-68
gb|AAM63760.1| unknown [Arabidopsis thaliana]                         258   7e-67

>ref|XP_004163437.1| PREDICTED: LOW QUALITY PROTEIN: allantoinase-like [Cucumis sativus]
          Length = 503

 Score =  264 bits (674), Expect = 9e-69
 Identities = 133/196 (67%), Positives = 153/196 (78%), Gaps = 8/196 (4%)
 Frame = -3

Query: 586 EGVISGAVEIKGGNIVSVVKGNYQNGKIIKGHVVNYGDAVVMPGLIDVHAHLDEPGRAEW 407
           +GVISGAVEI GG IVS+VK   ++GKI+  HVV+Y DAVVMPGL+DVH HLD+PGR+EW
Sbjct: 51  QGVISGAVEINGGKIVSIVKEEEKHGKIMGNHVVDYADAVVMPGLVDVHVHLDDPGRSEW 110

Query: 406 EGFSSXXXXXXXXXXXTLVDMPLNSEPSTVSVETLKLKVDAAEEKIYVDVGFWGGLVPDN 227
           EGF S           TLVDMPLN+ PST S ETLKLK+ AAE +IYVDVGFWGGLVP+N
Sbjct: 111 EGFPSGTKAAAAGGVTTLVDMPLNNFPSTTSEETLKLKIKAAEGRIYVDVGFWGGLVPEN 170

Query: 226 AFNVSALDRLLQAGVLGLKSFMCPSGINDFPMTNTSHIKEGLHVLAKYRRPLLVHAELE- 50
           AFN SAL+ LL+AG LGLKSFMCPSGINDFPMTN +HIKEGL VLAKY+RPLLVH+E+E 
Sbjct: 171 AFNASALENLLKAGALGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHSEIEQ 230

Query: 49  -------LELDSSDPK 23
                  LE    DP+
Sbjct: 231 SSPSPVQLEGSQDDPR 246


>ref|XP_004146596.1| PREDICTED: allantoinase-like [Cucumis sativus]
          Length = 503

 Score =  264 bits (674), Expect = 9e-69
 Identities = 133/196 (67%), Positives = 153/196 (78%), Gaps = 8/196 (4%)
 Frame = -3

Query: 586 EGVISGAVEIKGGNIVSVVKGNYQNGKIIKGHVVNYGDAVVMPGLIDVHAHLDEPGRAEW 407
           +GVISGAVEI GG IVS+VK   ++GKI+  HVV+Y DAVVMPGL+DVH HLD+PGR+EW
Sbjct: 51  QGVISGAVEINGGKIVSIVKEEEKHGKIMGNHVVDYADAVVMPGLVDVHVHLDDPGRSEW 110

Query: 406 EGFSSXXXXXXXXXXXTLVDMPLNSEPSTVSVETLKLKVDAAEEKIYVDVGFWGGLVPDN 227
           EGF S           TLVDMPLN+ PST S ETLKLK+ AAE +IYVDVGFWGGLVP+N
Sbjct: 111 EGFPSGTKAAAAGGVTTLVDMPLNNFPSTTSEETLKLKIKAAEGRIYVDVGFWGGLVPEN 170

Query: 226 AFNVSALDRLLQAGVLGLKSFMCPSGINDFPMTNTSHIKEGLHVLAKYRRPLLVHAELE- 50
           AFN SAL+ LL+AG LGLKSFMCPSGINDFPMTN +HIKEGL VLAKY+RPLLVH+E+E 
Sbjct: 171 AFNASALENLLKAGALGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHSEIEQ 230

Query: 49  -------LELDSSDPK 23
                  LE    DP+
Sbjct: 231 SSPSPVQLEGSQDDPR 246


>ref|XP_002874824.1| hypothetical protein ARALYDRAFT_490140 [Arabidopsis lyrata subsp.
           lyrata] gi|297320661|gb|EFH51083.1| hypothetical protein
           ARALYDRAFT_490140 [Arabidopsis lyrata subsp. lyrata]
          Length = 505

 Score =  263 bits (673), Expect = 1e-68
 Identities = 132/192 (68%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
 Frame = -3

Query: 586 EGVISGAVEIKGGNIVSVVKG-NYQNGKIIKGHVVNYGDAVVMPGLIDVHAHLDEPGRAE 410
           +G+ISG+VE+KGG IVSVVK  ++   +  +  V++YG+AV+MPGLIDVH HLD+PGR+E
Sbjct: 56  DGLISGSVEVKGGIIVSVVKEVDWHKSQRSRVKVIDYGEAVIMPGLIDVHVHLDDPGRSE 115

Query: 409 WEGFSSXXXXXXXXXXXTLVDMPLNSEPSTVSVETLKLKVDAAEEKIYVDVGFWGGLVPD 230
           WEGFSS           TLVDMPLNS PSTVS ETLKLK++AAE +I+VDVGFWGGLVPD
Sbjct: 116 WEGFSSGTKAAAAGGITTLVDMPLNSYPSTVSPETLKLKIEAAENRIHVDVGFWGGLVPD 175

Query: 229 NAFNVSALDRLLQAGVLGLKSFMCPSGINDFPMTNTSHIKEGLHVLAKYRRPLLVHAELE 50
           NA N SAL+ LL AGVLGLKSFMCPSGINDFPMTN +HIKEGL VLAKYRRPLLVHAE+E
Sbjct: 176 NALNASALESLLDAGVLGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYRRPLLVHAEVE 235

Query: 49  LELDSSDPKEND 14
            +L+  D  +ND
Sbjct: 236 KDLEIEDGNDND 247


>ref|XP_002519047.1| allantoinase, putative [Ricinus communis]
           gi|223541710|gb|EEF43258.1| allantoinase, putative
           [Ricinus communis]
          Length = 500

 Score =  261 bits (667), Expect = 6e-68
 Identities = 128/183 (69%), Positives = 151/183 (82%)
 Frame = -3

Query: 583 GVISGAVEIKGGNIVSVVKGNYQNGKIIKGHVVNYGDAVVMPGLIDVHAHLDEPGRAEWE 404
           GVISGAVE+K GNIVSVVK    +    +GH+++YG+ VVMPG IDVHAHLD+PGR EWE
Sbjct: 52  GVISGAVEVKEGNIVSVVKEEDWHVNFKRGHMIDYGEVVVMPGFIDVHAHLDDPGRTEWE 111

Query: 403 GFSSXXXXXXXXXXXTLVDMPLNSEPSTVSVETLKLKVDAAEEKIYVDVGFWGGLVPDNA 224
           GF S           TL+DMPLNS+PSTVSVETL+LK++AAE+ IYVDVGFWGGLVP+NA
Sbjct: 112 GFPSGTKAAAAGGITTLIDMPLNSDPSTVSVETLRLKLEAAEKNIYVDVGFWGGLVPENA 171

Query: 223 FNVSALDRLLQAGVLGLKSFMCPSGINDFPMTNTSHIKEGLHVLAKYRRPLLVHAELELE 44
           FN S+L+ LL AGVLGLKSFMCPSGINDFPMT+ +HIKEGL VLAKYRRPLLVHAE++ +
Sbjct: 172 FNGSSLEALLSAGVLGLKSFMCPSGINDFPMTDATHIKEGLSVLAKYRRPLLVHAEIQQD 231

Query: 43  LDS 35
            +S
Sbjct: 232 SES 234


>gb|AAM63760.1| unknown [Arabidopsis thaliana]
          Length = 506

 Score =  258 bits (658), Expect = 7e-67
 Identities = 130/191 (68%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
 Frame = -3

Query: 583 GVISGAVEIKGGNIVSVVKG-NYQNGKIIKGHVVNYGDAVVMPGLIDVHAHLDEPGRAEW 407
           G+ISG+VE+KGG IVSVVK  ++   +  +  V++YG+AV+MPGLIDVH HLD+PGR+EW
Sbjct: 57  GLISGSVEVKGGIIVSVVKEVDWHKSQRSRVKVIDYGEAVLMPGLIDVHVHLDDPGRSEW 116

Query: 406 EGFSSXXXXXXXXXXXTLVDMPLNSEPSTVSVETLKLKVDAAEEKIYVDVGFWGGLVPDN 227
           EGF S           TLVDMPLNS PSTVS ETLKLK++AA+ +I+VDVGFWGGLVPDN
Sbjct: 117 EGFPSGTKAAAAGGITTLVDMPLNSFPSTVSPETLKLKIEAAKNRIHVDVGFWGGLVPDN 176

Query: 226 AFNVSALDRLLQAGVLGLKSFMCPSGINDFPMTNTSHIKEGLHVLAKYRRPLLVHAELEL 47
           A N SAL+ LL AGVLGLKSFMCPSGINDFPMTN +HIKEGL VLAKY+RPLLVHAE+E 
Sbjct: 177 ALNSSALESLLDAGVLGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHAEIER 236

Query: 46  ELDSSDPKEND 14
           +L+  D  END
Sbjct: 237 DLEIEDGSEND 247


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