BLASTX nr result

ID: Coptis21_contig00035082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035082
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACE80961.1| putative allergen Pru p 2.03 [Prunus dulcis x Pru...    64   2e-08
gb|ACE80960.1| putative allergen Pru du 2.03 [Prunus dulcis x Pr...    64   2e-08
ref|XP_002317878.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|EGT36141.1| hypothetical protein CAEBREN_31055 [Caenorhabditi...    62   4e-08
ref|XP_002322099.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>gb|ACE80961.1| putative allergen Pru p 2.03 [Prunus dulcis x Prunus persica]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
 Frame = +1

Query: 58  KNLTFSLPKLLSVDLWVRSFCPN---TSGLCATGDCD------ADYNCIPIATTMVRIIS 210
           K+ T S+PK  S  +W R+ C     T+  C TGDC       A     P AT     ++
Sbjct: 61  KSRTLSVPKAWSGRIWARTLCTEYSPTNFSCVTGDCGSGKIECAGSGAKPPATLAEFTLN 120

Query: 211 GTKQ-DSYAITLINGFNIPVLVTPLGNK--GCSATSCSVDVN 327
           G    D Y ++L++G+N+P+LV P G    GCSAT C VD+N
Sbjct: 121 GADGLDFYDVSLVDGYNLPMLVVPRGGTRGGCSATGCLVDLN 162


>gb|ACE80960.1| putative allergen Pru du 2.03 [Prunus dulcis x Prunus persica]
          Length = 277

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
 Frame = +1

Query: 58  KNLTFSLPKLLSVDLWVRSFCPN---TSGLCATGDCD------ADYNCIPIATTMVRIIS 210
           K+ T S+PK  S  +W R+ C     T+  C TGDC       A     P AT     ++
Sbjct: 61  KSRTLSVPKAWSGRIWARTLCTEYSPTNFSCVTGDCGSGKIECAGSGAKPPATLAEFTLN 120

Query: 211 GTKQ-DSYAITLINGFNIPVLVTPLGNK--GCSATSCSVDVN 327
           G    D Y ++L++G+N+P+LV P G    GCSAT C VD+N
Sbjct: 121 GADGLDFYDVSLVDGYNLPMLVVPRGGTRGGCSATGCLVDLN 162


>ref|XP_002317878.1| predicted protein [Populus trichocarpa] gi|222858551|gb|EEE96098.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
 Frame = +1

Query: 49  PFKKNLTFSLPKLLSVDLWVR---SFCPNTSGLCATGDCDADYNCIPIA----TTMVRII 207
           P  K  T  +P L S  LW R   SF  +  G CATGDC     C  I      T+  I 
Sbjct: 60  PPNKAYTLHIPPLWSGRLWGRHGCSFDASGRGRCATGDCGGSLYCNGIGGTPPATLAEIT 119

Query: 208 SGTKQDSYAITLINGFNIPVLVTPLGNKG-CSATSCSVDVN 327
            G +QD Y ++L++G+N+ + +TP    G CS   C  D+N
Sbjct: 120 LGNEQDFYDVSLVDGYNLAISITPFKGSGKCSYAGCVSDLN 160


>gb|EGT36141.1| hypothetical protein CAEBREN_31055 [Caenorhabditis brenneri]
          Length = 234

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
 Frame = +1

Query: 100 LWVRSFCPNTSGLCATGDCDADYNC------IPIATTMVRIISGTKQDSYAITLINGFNI 261
           +W R+FC      CATGDC     C       P       +     +D Y+++LING+N+
Sbjct: 65  IWGRTFCDRRMR-CATGDCGNREQCNGTLGRFPFTVAEFNLNEANDEDVYSVSLINGYNV 123

Query: 262 PVLVTPLGNKGC-SATSCSVDVND 330
           P+L+ P G KGC  A  C  D+N+
Sbjct: 124 PILIDPFGGKGCLRAGGCFSDINE 147


>ref|XP_002322099.1| predicted protein [Populus trichocarpa] gi|222869095|gb|EEF06226.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
 Frame = +1

Query: 49  PFKKNLTFSLPKLLSVDLWVR---SFCPNTSGLCATGDCDADYNCIPIA----TTMVRII 207
           P  K  T +LP L S  LW R   SF  +  G CATGDC     C  I      T+  I 
Sbjct: 60  PPNKAYTLNLPPLWSGRLWGRHGCSFDASGRGGCATGDCGGSLYCNGIGGTPPATLAEIT 119

Query: 208 SGTKQDSYAITLINGFNIPVLVTPLGNKG-CSATSCSVDVN 327
            G  QD Y ++L++G+N+ + +TP    G CS   C  D+N
Sbjct: 120 LGNDQDFYDVSLVDGYNLAISITPFKGSGKCSYAGCVRDLN 160


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