BLASTX nr result

ID: Coptis21_contig00035037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035037
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18449.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...    95   6e-18
gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japo...    92   4e-17
ref|XP_002513311.1| splicing endonuclease positive effector sen1...    77   2e-12
ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835...    72   4e-11

>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
 Frame = -2

Query: 537  FVLRKLLNEMVTFS---QKAPGNRVDSSSFSSQGGFLRQPVFTASAVELTGPPNDVDSKS 367
            FVL KLL E V  +   Q+      + S FSSQGGFLRQP F +    + G  +  DSKS
Sbjct: 802  FVLCKLLKEGVICTSDPQRHSSGIKNISKFSSQGGFLRQPAFDSFPENVNGHSSVDDSKS 861

Query: 366  WDRFXXXXXXXXXXXXSKCLVGGKGFINNKSSQMSCIRLLEILPVVFERLCSSLHKLSRT 187
             ++F             KCLV GK F++ K SQ++   L E   ++ +R  +S+   S  
Sbjct: 862  REKFSCLLSEITWPFIRKCLVEGKAFVDYKISQLTLGYLFENHALLSKRTKASVRIFSLK 921

Query: 186  EISY--IDLRWLQDLVDWGRSSQAILARYWKQALTTLIYILSNLCHHDSASTFRAIEALM 13
            +ISY  +  R++   + WG         YW+Q + +L+++L   C   SAS  RAIE L+
Sbjct: 922  DISYRLVLPRFIFYQIRWGLRLSFCWVGYWRQTMISLLHLLKGSCSDKSASFIRAIENLI 981

Query: 12   SCD 4
            SCD
Sbjct: 982  SCD 984


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|332191377|gb|AEE29498.1| hydrolase domain-containing
            protein [Arabidopsis thaliana]
          Length = 2127

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 61/155 (39%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
 Frame = -2

Query: 456  SSQGGFLRQPVFTASAVELTGPPNDVDSKSWDRFXXXXXXXXXXXXSKCLVGGKGFINNK 277
            SS GGFLRQP F A  V     P    +    +F             KCLV GK FI+  
Sbjct: 645  SSAGGFLRQPNFNALPVSEGRNPLS-STPELLKFQYLLAEVAWGIIRKCLVEGKTFIHQS 703

Query: 276  SSQMSCIRLLEILPVVFERLCSSLHKLSRTEISY---IDLRWLQDLVDWGRSSQAILARY 106
              QM+C+RLLEILPVV  +L  S  +   T  +     DL+WL DL+DWGRS   ++  Y
Sbjct: 704  LCQMTCVRLLEILPVVLGKLRVSREESCDTRGTLKDASDLKWLPDLIDWGRSQLKVVVAY 763

Query: 105  WKQALTTLIYILSNLCHHDSASTFRAIEALMSCDD 1
            WK+AL  L+ IL        +S  +AI  ++S  D
Sbjct: 764  WKRALVALLDILQGSNSDACSSAVQAIRHVLSSGD 798


>gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
          Length = 2215

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
 Frame = -2

Query: 537  FVLRKLLNEMVTFSQKAPGNRVDSSSFSSQGGFLRQPVFTASAVELTGPPNDVDSKSWDR 358
            FV+ KLL ++V    + P   + +  F  +GGFLRQ   + S V +  P + VD  SW++
Sbjct: 622  FVICKLLKDVVV---QQPSVALQAKPF--EGGFLRQ---SFSNVSVNLPQHSVDIISWEK 673

Query: 357  FXXXXXXXXXXXXSKCLVGGKGFINNKSSQMSCIRLLEILPVVFERLCSSLHKLS----R 190
            F              CL  G   IN K  Q+SC+RLLE++P+V+ER+ S     S     
Sbjct: 674  FSTLLSGALWPFIFTCLRKGDDLINTKQCQISCVRLLELVPLVYERVSSYSSAKSCGVPT 733

Query: 189  TEISYIDLRWLQDLVDWGRSSQAILARYWKQALTTLIYIL 70
              +   D+ WL  L++WG+SS  ++ R+WKQ + +LI IL
Sbjct: 734  MVLDPTDITWLFHLINWGKSSLLVIIRHWKQCMLSLIKIL 773


>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
           communis] gi|223547219|gb|EEF48714.1| splicing
           endonuclease positive effector sen1, putative [Ricinus
           communis]
          Length = 2110

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
 Frame = -2

Query: 270 QMSCIRLLEILPVVFERLCSSLHKLSR----TEISYIDLRWLQDLVDWGRSSQAILARYW 103
           QM+C+R+LEILPVV+ERLC S+ K SR    T  +  D  WL DL+DWGRSS  ++  YW
Sbjct: 533 QMTCVRVLEILPVVYERLCPSIRKRSRDSGKTVENLWDFIWLHDLIDWGRSSLKVVVVYW 592

Query: 102 KQALTTLI 79
           K+ +T+L+
Sbjct: 593 KRTVTSLL 600


>ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
           distachyon]
          Length = 2045

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
 Frame = -2

Query: 537 FVLRKLLNEMVTFSQKAPGNRVDSSSFSSQGGFLRQPVFTASAVELTGPPNDVDSKSWDR 358
           FV+ KL+ E +     A    V   +  S+GGFLRQP    S V +T P + VD  +W++
Sbjct: 447 FVVCKLVKEDI-----AQQPSVAQPAKPSEGGFLRQPF---SNVLITPPEHAVDIITWEK 498

Query: 357 FXXXXXXXXXXXXSKCLVGGKGFINNKSSQMSCIRLLEILPVVFERL---CSSLHKLSRT 187
           F                             +SC+R+LE+LP+V+ER+   C+    ++  
Sbjct: 499 FSTLL------------------------SISCVRVLELLPLVYERVNSYCTQPFSVTTM 534

Query: 186 EISYIDLRWLQDLVDWGRSSQAILARYWKQALTTLIYIL-----SNLCHH--DSASTF 34
                D+ WL  L++WG+SS  +++R+WKQ + +L  +L      ++ HH  D   TF
Sbjct: 535 VPDSNDITWLFHLINWGKSSLLVISRHWKQCMLSLFKLLKGSHSGSIQHHIEDLGDTF 592


Top