BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035033
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...    91   3e-16
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
emb|CBI31329.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13

>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = -3

Query: 805 VEHFSCMVDLFGNAGLPRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KML 629
           VEHFSCMVDLFG AGL  KA ++IT MPYRP+ AM ATLV A RI+GNT I +WA  K+L
Sbjct: 518 VEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLL 577

Query: 628 EVRPED*IRHLLIAKL 581
           E++PE+   ++LIA +
Sbjct: 578 EMKPENPGYYVLIANM 593


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = -3

Query: 808 RVEHFSCMVDLFGNAGLPRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KM 632
           R+EHF+CMVDLFG AGL  KA ++IT MPYRPS AM ATL+ A RI+GN  I +WA  K+
Sbjct: 568 RLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKL 627

Query: 631 LEVRPED*IRHLLIAKL 581
           LE+RPE+   ++LIA +
Sbjct: 628 LEMRPENSGYYVLIANM 644


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 40/77 (51%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -3

Query: 808 RVEHFSCMVDLFGNAGLPRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KM 632
           R+EH++CM DLFG AGL  KA + IT MPY+P+ AM ATL+ A RI+GNT + +WA  K+
Sbjct: 555 RLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKL 614

Query: 631 LEVRPED*IRHLLIAKL 581
           LE++P+    ++LIA +
Sbjct: 615 LEMKPDHSGYYVLIANM 631


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = -3

Query: 805 VEHFSCMVDLFGNAGLPRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KML 629
           +EHF+CM DLFG AGL  KA +II  MPY+P+ AM ATL+ A RI+ NT I +WA  K+L
Sbjct: 531 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLL 590

Query: 628 EVRPED*IRHLLIAKL 581
           E++PE+   ++LIA +
Sbjct: 591 EMKPENPGYYVLIANM 606


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
 Frame = -3

Query: 805 VEHFSCMVDLFGNAGLPRKAVQIITEMPYRPSHAMLATLVSASRIYGNTTIMDWAT-KML 629
           +EHF+CM DLFG AGL  KA +II  MPY+P+ AM ATL+ A RI+ NT I +WA  K+L
Sbjct: 576 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLL 635

Query: 628 EVRPED*IRHLLIAKL 581
           E++PE+   ++LIA +
Sbjct: 636 EMKPENPGYYVLIANM 651