BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035014
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39303.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [S...    80   2e-13
tpg|DAA55756.1| TPA: putative pentatricopeptide repeat family pr...    76   3e-12
gb|AFV08644.1| EMP5 [Zea mays] gi|409032182|gb|AFV08645.1| EMP5 ...    76   3e-12

>emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = +2

Query: 80  DGYRYFESMKNDHGLNPNVKHCASVVDLLGRAGRLDDAEKFIMQSGFENDAVMWR 244
           +G RYFE MK DHG+ PNVKH A +VDLLGRAGRL +AE FIM SGFE D VMWR
Sbjct: 470 EGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 524


>ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = +2

Query: 80  DGYRYFESMKNDHGLNPNVKHCASVVDLLGRAGRLDDAEKFIMQSGFENDAVMWR 244
           +G RYFE MK DHG+ PNVKH A +VDLLGRAGRL +AE FIM SGFE D VMWR
Sbjct: 549 EGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 603


>ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
           gi|241928942|gb|EES02087.1| hypothetical protein
           SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = +2

Query: 80  DGYRYFESMKNDHGLNPNVKHCASVVDLLGRAGRLDDAEKFIMQSGFENDAVMWR 244
           DG RY+E MKN++GL+P +KH   VVDLLGRAGRL DAE FI  S F +DAV+WR
Sbjct: 533 DGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWR 587


>tpg|DAA55756.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 465

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = +2

Query: 80  DGYRYFESMKNDHGLNPNVKHCASVVDLLGRAGRLDDAEKFIMQSGFENDAVMWR 244
           +G RY+  M +++GL+P +KHC  VVDLLGRAGRL DAE FI  S F +DAV+WR
Sbjct: 226 EGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWR 280


>gb|AFV08644.1| EMP5 [Zea mays] gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
           gi|414878626|tpg|DAA55757.1| TPA: putative
           pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = +2

Query: 80  DGYRYFESMKNDHGLNPNVKHCASVVDLLGRAGRLDDAEKFIMQSGFENDAVMWR 244
           +G RY+  M +++GL+P +KHC  VVDLLGRAGRL DAE FI  S F +DAV+WR
Sbjct: 537 EGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWR 591