BLASTX nr result

ID: Coptis21_contig00034996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034996
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus commun...   117   2e-24
emb|CAN83938.1| hypothetical protein VITISV_042336 [Vitis vinifera]   110   2e-22
ref|XP_002320701.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
gb|ABR17060.1| unknown [Picea sitchensis]                             105   6e-21
ref|XP_002865635.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   102   8e-20

>ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus communis]
           gi|223533358|gb|EEF35109.1| fad oxidoreductase, putative
           [Ricinus communis]
          Length = 489

 Score =  117 bits (293), Expect = 2e-24
 Identities = 51/78 (65%), Positives = 62/78 (79%)
 Frame = -3

Query: 650 LEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLF 471
           L +L+ SRK+R+GLRPYMPDGKP+I  +P  P VL+A GHEG GL+LALGTAEMV +M+ 
Sbjct: 412 LGDLTASRKLRIGLRPYMPDGKPVIGSIPDFPNVLIATGHEGGGLSLALGTAEMVADMVL 471

Query: 470 GNPSEINYVPFSFHGRCC 417
           GNP  +NY PFS  GRCC
Sbjct: 472 GNPGTVNYAPFSVQGRCC 489


>emb|CAN83938.1| hypothetical protein VITISV_042336 [Vitis vinifera]
          Length = 275

 Score =  110 bits (276), Expect = 2e-22
 Identities = 47/77 (61%), Positives = 62/77 (80%)
 Frame = -3

Query: 650 LEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLF 471
           L + ++SR+VRVGLRPYMPDGKP+I PVPG   + +A GHEG GL++ALGTAEMV +M+ 
Sbjct: 198 LNDFTRSREVRVGLRPYMPDGKPLIGPVPGFSNLFLATGHEGGGLSMALGTAEMVVDMVL 257

Query: 470 GNPSEINYVPFSFHGRC 420
           GNP +++Y PF+  GRC
Sbjct: 258 GNPGKVDYAPFAVQGRC 274


>ref|XP_002320701.1| predicted protein [Populus trichocarpa] gi|222861474|gb|EEE99016.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  110 bits (274), Expect = 3e-22
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = -3

Query: 650 LEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLF 471
           LE+ +  RKVR+GLRPYMPDGKP+I PVPG+  V++A GHEG GL++ALGTAEMV +M+ 
Sbjct: 82  LEDFTLDRKVRIGLRPYMPDGKPVIGPVPGLMNVIIATGHEGGGLSMALGTAEMVADMVL 141

Query: 470 GNPSEINYVPFSFHGRCC 417
           GNP  ++   F+  GRCC
Sbjct: 142 GNPGIVDLAAFALQGRCC 159


>gb|ABR17060.1| unknown [Picea sitchensis]
          Length = 526

 Score =  105 bits (263), Expect = 6e-21
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = -3

Query: 650 LEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLF 471
           L EL K   +R+GLRPYMPDGKPII PVP +PK+++A GHEGAGL +A GTAEMV  M+ 
Sbjct: 448 LRELLKGGHIRIGLRPYMPDGKPIIGPVPNLPKLMLATGHEGAGLCMAFGTAEMVVEMIL 507

Query: 470 GNPSEINYVPFSFHGRCCE 414
           GN ++I+  PFS   RCC+
Sbjct: 508 GNATKIDCRPFSPKDRCCK 526


>ref|XP_002865635.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297311470|gb|EFH41894.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 458

 Score =  102 bits (253), Expect = 8e-20
 Identities = 45/78 (57%), Positives = 59/78 (75%)
 Frame = -3

Query: 650 LEELSKSRKVRVGLRPYMPDGKPIISPVPGVPKVLVAAGHEGAGLTLALGTAEMVFNMLF 471
           LE+  ++RKVRVGLRPYMPDGKP+I  VPG+  + +AAGHEG GL++AL TAEMV +M+ 
Sbjct: 381 LEDFIRNRKVRVGLRPYMPDGKPVIGSVPGLQNLYLAAGHEGGGLSMALATAEMVTDMVL 440

Query: 470 GNPSEINYVPFSFHGRCC 417
           G P +++   F   GRCC
Sbjct: 441 GKPEQVDSSAFGVKGRCC 458


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