BLASTX nr result

ID: Coptis21_contig00034992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034992
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18428.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244...   165   4e-39
ref|XP_002513303.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
emb|CBW30242.1| mTERF domain-containing protein, mitochondrial [...   153   1e-35
emb|CBW30201.1| mTERF domain-containing protein, mitochondrial [...   153   1e-35

>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/115 (66%), Positives = 98/115 (85%)
 Frame = -3

Query: 346 SIQENYNDVLSFLELEKVPKVRVDLAIKSWPHILGCSTNKMKTMVAQLGELGIKSKKLGQ 167
           SIQENY ++LSF   EKVPK  VD  IKSWPH+LGCST+K+K +V Q GEL +++KKLGQ
Sbjct: 330 SIQENYEEILSFFYREKVPKSSVDSGIKSWPHLLGCSTSKLKLIVEQFGELDVRNKKLGQ 389

Query: 166 VLAQSPQLLLRRPHEVLQVVSFMEELGFDKESIGRTVIRCPEIFAASIENTLKKK 2
           ++A SPQLLL++P+E L+VVSF+EELGFD+E++GR + RCPEIFAA+IE TLKKK
Sbjct: 390 IIATSPQLLLQKPNEFLEVVSFLEELGFDRETVGRILGRCPEIFAANIEKTLKKK 444


>ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244378 [Vitis vinifera]
          Length = 601

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/115 (66%), Positives = 98/115 (85%)
 Frame = -3

Query: 346 SIQENYNDVLSFLELEKVPKVRVDLAIKSWPHILGCSTNKMKTMVAQLGELGIKSKKLGQ 167
           SIQENY ++LSF   EKVPK  VD  IKSWPH+LGCST+K+K +V Q GEL +++KKLGQ
Sbjct: 330 SIQENYEEILSFFYREKVPKSSVDSGIKSWPHLLGCSTSKLKLIVEQFGELDVRNKKLGQ 389

Query: 166 VLAQSPQLLLRRPHEVLQVVSFMEELGFDKESIGRTVIRCPEIFAASIENTLKKK 2
           ++A SPQLLL++P+E L+VVSF+EELGFD+E++GR + RCPEIFAA+IE TLKKK
Sbjct: 390 IIATSPQLLLQKPNEFLEVVSFLEELGFDRETVGRILGRCPEIFAANIEKTLKKK 444


>ref|XP_002513303.1| conserved hypothetical protein [Ricinus communis]
           gi|223547211|gb|EEF48706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 574

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/115 (62%), Positives = 95/115 (82%)
 Frame = -3

Query: 346 SIQENYNDVLSFLELEKVPKVRVDLAIKSWPHILGCSTNKMKTMVAQLGELGIKSKKLGQ 167
           SIQ+NY ++LSF + EKV K  +D AI+SWPH+LGCST+K+K +V   G LG+K KK+G 
Sbjct: 325 SIQDNYKEILSFCDAEKVAKASIDKAIRSWPHLLGCSTSKLKVIVDHFGILGVKHKKVGH 384

Query: 166 VLAQSPQLLLRRPHEVLQVVSFMEELGFDKESIGRTVIRCPEIFAASIENTLKKK 2
           V+A+SPQLLLR+P E LQVVSF++ELGFD+ES+G+ ++RCPEIFA S E TL+KK
Sbjct: 385 VIAKSPQLLLRKPEEFLQVVSFLKELGFDQESVGKILVRCPEIFATSAEKTLRKK 439


>emb|CBW30242.1| mTERF domain-containing protein, mitochondrial [Musa balbisiana]
          Length = 610

 Score =  153 bits (387), Expect = 1e-35
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -3

Query: 346 SIQENYNDVLSFLELEKVPKVRVDLAIKSWPHILGCSTNKMKTMVAQLGELGIKSKKLGQ 167
           SIQENY  +L+F   +KVPK  VDLAI+SWPHILGCS  KMK+MV Q  E G+K K L  
Sbjct: 345 SIQENYEKILAFFNEKKVPKSSVDLAIRSWPHILGCSATKMKSMVEQFNEFGVKKKMLVP 404

Query: 166 VLAQSPQLLLRRPHEVLQVVSFMEELGFDKESIGRTVIRCPEIFAASIENTLKKK 2
           V+  SPQLLL++P E  +VVSFMEE+GFD ++IGR + RCPEIFA+S++NTL+KK
Sbjct: 405 VITSSPQLLLKKPKEFQEVVSFMEEIGFDSKTIGRILCRCPEIFASSVDNTLRKK 459


>emb|CBW30201.1| mTERF domain-containing protein, mitochondrial [Musa balbisiana]
          Length = 610

 Score =  153 bits (387), Expect = 1e-35
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -3

Query: 346 SIQENYNDVLSFLELEKVPKVRVDLAIKSWPHILGCSTNKMKTMVAQLGELGIKSKKLGQ 167
           SIQENY  +L+F   +KVPK  VDLAI+SWPHILGCS  KMK+MV Q  E G+K K L  
Sbjct: 345 SIQENYEKILAFFNEKKVPKSSVDLAIRSWPHILGCSATKMKSMVEQFNEFGVKKKMLVP 404

Query: 166 VLAQSPQLLLRRPHEVLQVVSFMEELGFDKESIGRTVIRCPEIFAASIENTLKKK 2
           V+  SPQLLL++P E  +VVSFMEE+GFD ++IGR + RCPEIFA+S++NTL+KK
Sbjct: 405 VITSSPQLLLKKPKEFQEVVSFMEEIGFDSKTIGRILCRCPEIFASSVDNTLRKK 459


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