BLASTX nr result

ID: Coptis21_contig00034990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034990
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV30821.1| NBS-containing resistance-like protein [Platanus ...    75   6e-21
emb|CAN70524.1| hypothetical protein VITISV_010211 [Vitis vinifera]    79   2e-18
emb|CAN74100.1| hypothetical protein VITISV_028592 [Vitis vinifera]    80   3e-18
gb|ABV30816.1| NBS-containing resistance-like protein [Platanus ...    81   3e-18
gb|ABV30817.1| NBS-containing resistance-like protein [Platanus ...    80   5e-18

>gb|ABV30821.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 156

 Score = 75.1 bits (183), Expect(2) = 6e-21
 Identities = 42/108 (38%), Positives = 62/108 (57%)
 Frame = +2

Query: 17  LLRKINNEFLKTSSVFDFVVWAEISKGAETSKEIDIVRLQSIIRRRLELSWAEDADLSSR 196
           L++KIN EFLK S  F  V+W  +SK      ++++ R+Q  I  RL LSW +D +   +
Sbjct: 1   LMKKINEEFLKRSHEFAVVIWITVSK------QMNVERIQKKIAERLGLSWVDDREQEDQ 54

Query: 197 A*VILSFLMKKRFLYCCSMTYANG*RIDLLKIGIPQPGSQNKCKVIFT 340
           A  IL  L  K+F+      +    R+DL  +GIP P ++NK KV+FT
Sbjct: 55  AKYILGALRGKKFVLLLDDIWE---RVDLESVGIPTPDTRNKSKVVFT 99



 Score = 50.4 bits (119), Expect(2) = 6e-21
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +3

Query: 333 YLQRSEALCGLMDADRKIRLECLNRDQAWTLFQ 431
           +  RSEA+CGLM+A++KI++ECL+ D+AW LFQ
Sbjct: 98  FTTRSEAVCGLMEANKKIKVECLDWDEAWNLFQ 130


>emb|CAN70524.1| hypothetical protein VITISV_010211 [Vitis vinifera]
          Length = 946

 Score = 79.0 bits (193), Expect(2) = 2e-18
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
 Frame = +2

Query: 2   VRKTTLLRKINNEFLKTSSVFDFVVWAEISKGAETSKEIDIVRLQSIIRRRLELS---WA 172
           V KTTLL+KINN+FL T S FD V+W  +SK +      +I ++Q +I  +L++    W 
Sbjct: 180 VGKTTLLKKINNDFLTTPSDFDVVIWVVVSKPS------NIEKIQEVIWNKLQIPRDIWE 233

Query: 173 EDADLSSRA*VILSFLMKKRFLYCCSMTYANG*RIDLLKIGIPQPGSQNKCKVIFT 340
             +    +A  IL  L  KRF+      +    R+DLL+IG+P P +QNK K++FT
Sbjct: 234 SRSTKEEKAVEILRVLKTKRFVLLLDDIWE---RLDLLEIGVPHPDAQNKSKIVFT 286



 Score = 38.5 bits (88), Expect(2) = 2e-18
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 333 YLQRSEALCGLMDADRKIRLECLNRDQAWTLFQ 431
           +  RS+ +C  M A + I++ECL+ + AWTLFQ
Sbjct: 285 FTTRSQDVCRQMQAQKSIKVECLSSEAAWTLFQ 317


>emb|CAN74100.1| hypothetical protein VITISV_028592 [Vitis vinifera]
          Length = 361

 Score = 79.7 bits (195), Expect(2) = 3e-18
 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = +2

Query: 2   VRKTTLLRKINNEFLKTSSVFDFVVWAEISKGAETSKEIDIVRLQSIIRRRLELS---WA 172
           V KTTLL+KINN+FL TSS FD V+W E SK           ++Q +I  +L+LS   W 
Sbjct: 180 VGKTTLLKKINNDFLPTSSDFDLVIWVEASK---------TKKIQKVIWNKLQLSRDGWE 230

Query: 173 EDADLSSRA*VILSFLMKKRFLYCCSMTYANG*RIDLLKIGIPQPGSQNKCKVIFT 340
             +    +A  IL  L  K+F+      +    R+DLL++G+P P +QNK K++FT
Sbjct: 231 NRSTKEEKAAEILRVLKTKKFVLLLDDIWE---RLDLLEMGVPHPDAQNKSKIVFT 283



 Score = 37.0 bits (84), Expect(2) = 3e-18
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 333 YLQRSEALCGLMDADRKIRLECLNRDQAWTLFQ 431
           +  RS+ +C  M A   I++ECL+ + AWTLFQ
Sbjct: 282 FTTRSQDVCRQMQAQEGIKVECLSSEAAWTLFQ 314


>gb|ABV30816.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 156

 Score = 81.3 bits (199), Expect(2) = 3e-18
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = +2

Query: 14  TLLRKINNEFLKTSSVFDFVVWAEISKGAETSKEIDIVRLQSIIRRRLELSWAEDADLSS 193
           TL++KINNEFL  +  FD V+W  +      SK  +I R+Q  I +RL LSW E+     
Sbjct: 1   TLMKKINNEFLNRTHEFDVVIWVTV------SKPTNIPRIQKEIVQRLGLSWNEERTQEY 54

Query: 194 RA*VILSFLMKKRFLYCCSMTYANG*RIDLLKIGIPQPGSQNKCKVIFT 340
           +A  IL+ L+KK+F+      +    R+DL+ +GIP P +QNK KVIFT
Sbjct: 55  QAKEILNVLVKKKFVMLLDDIWD---RVDLVSLGIPTPDTQNKSKVIFT 100



 Score = 35.4 bits (80), Expect(2) = 3e-18
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = +3

Query: 333 YLQRSEALCGLMDADRKIRLECLNRDQAWTLFQ 431
           +  RSE +C  M A+ KI +ECL++D+AW LF+
Sbjct: 99  FTTRSEDVCKRMGAN-KIEVECLDKDKAWNLFK 130


>gb|ABV30817.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 156

 Score = 79.7 bits (195), Expect(2) = 5e-18
 Identities = 46/109 (42%), Positives = 66/109 (60%)
 Frame = +2

Query: 14  TLLRKINNEFLKTSSVFDFVVWAEISKGAETSKEIDIVRLQSIIRRRLELSWAEDADLSS 193
           TL++KINNEFL  +  FD V+W  +S+        +I R+Q  I +RL LSW E+     
Sbjct: 1   TLMKKINNEFLNRTHEFDVVIWVTVSEPT------NIPRIQKEIVQRLGLSWNEERTQEY 54

Query: 194 RA*VILSFLMKKRFLYCCSMTYANG*RIDLLKIGIPQPGSQNKCKVIFT 340
           +A  IL+ L+KK+F+      +    R+DL+ +GIP P +QNK KVIFT
Sbjct: 55  QAKEILNVLVKKKFVMLLDDIWD---RVDLVSLGIPTPDTQNKSKVIFT 100



 Score = 36.2 bits (82), Expect(2) = 5e-18
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = +3

Query: 333 YLQRSEALCGLMDADRKIRLECLNRDQAWTLFQ 431
           +  RSE +C  M A+ KI +ECL++D+AW LF+
Sbjct: 99  FTTRSEGVCKRMGAN-KIEVECLDKDKAWNLFK 130


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