BLASTX nr result

ID: Coptis21_contig00034978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034978
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G...    94   9e-18
emb|CBI26389.3| unnamed protein product [Vitis vinifera]               94   9e-18
emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]    94   9e-18
emb|CBI26390.3| unnamed protein product [Vitis vinifera]               91   1e-16
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]     91   1e-16

>ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 678

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +2

Query: 2   TGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLSYRPSQMPVLQIMGYSYIIFMPLNSVFVL 181
           +G TN+ D L+Q TRW SGL  V++SK  PL Y P +M +L+   Y+Y+ + PL  + V 
Sbjct: 418 SGVTNMNDLLVQGTRWSSGLFDVAISKFSPLIYGPLRMSILESFCYAYLAYFPLYFISVW 477

Query: 182 CHCIIPQLCLLNGIALYPKVSD 247
           C  IIPQLCLLNGI LYPKVSD
Sbjct: 478 CFGIIPQLCLLNGIPLYPKVSD 499


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +2

Query: 2   TGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLSYRPSQMPVLQIMGYSYIIFMPLNSVFVL 181
           +G TN+ D L+Q TRW SGL  V++SK  PL Y P +M +L+   Y+Y+ + PL  + V 
Sbjct: 540 SGVTNMNDLLVQGTRWSSGLFDVAISKFSPLIYGPLRMSILESFCYAYLAYFPLYFISVW 599

Query: 182 CHCIIPQLCLLNGIALYPKVSD 247
           C  IIPQLCLLNGI LYPKVSD
Sbjct: 600 CFGIIPQLCLLNGIPLYPKVSD 621


>emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]
          Length = 643

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +2

Query: 2   TGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLSYRPSQMPVLQIMGYSYIIFMPLNSVFVL 181
           +G TN+ D L+Q TRW SGL  V++SK  PL Y P +M +L+   Y+Y+ + PL  + V 
Sbjct: 383 SGVTNMNDMLVQGTRWSSGLFDVAISKFSPLIYGPLRMSILESFCYAYLAYFPLYFISVW 442

Query: 182 CHCIIPQLCLLNGIALYPKVSD 247
           C  IIPQLCLLNGI LYPKVSD
Sbjct: 443 CFGIIPQLCLLNGIPLYPKVSD 464


>emb|CBI26390.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/81 (53%), Positives = 56/81 (69%)
 Frame = +2

Query: 2   TGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLSYRPSQMPVLQIMGYSYIIFMPLNSVFVL 181
           +G TN+ D L+Q TRW SGL  V++SK  PL Y P +M +L+   Y+Y+ + PL  + V 
Sbjct: 281 SGVTNMNDMLVQGTRWSSGLFDVAISKFSPLIYGPLRMSILESFCYAYLAYFPLYFISVW 340

Query: 182 CHCIIPQLCLLNGIALYPKVS 244
           C  IIPQLCLLNGI LYPKV+
Sbjct: 341 CFGIIPQLCLLNGIPLYPKVT 361


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%)
 Frame = +2

Query: 2   TGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLSYRPSQMPVLQIMGYSYIIFMPLNSVFVL 181
           +  TNL D L+Q TRW SGL +V+LSK CP  Y  S+MP+LQ M Y Y+   PL  + + 
Sbjct: 463 SSTTNLNDLLVQGTRWNSGLFEVTLSKFCPFIYGLSRMPLLQTMCYGYLALQPLYFLPLW 522

Query: 182 CHCIIPQLCLLNGIALYPKVS 244
           C   +PQLCLLNGI +YP+VS
Sbjct: 523 CLATLPQLCLLNGIPIYPQVS 543


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