BLASTX nr result
ID: Coptis21_contig00034968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034968 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23583.3| unnamed protein product [Vitis vinifera] 159 2e-37 ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a... 159 2e-37 emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] 158 4e-37 ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin... 148 4e-34 ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a... 148 5e-34 >emb|CBI23583.3| unnamed protein product [Vitis vinifera] Length = 1287 Score = 159 bits (402), Expect = 2e-37 Identities = 72/101 (71%), Positives = 87/101 (86%), Gaps = 2/101 (1%) Frame = -2 Query: 297 LDKLTRQFLETS--SNTSGHSVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAH 124 L KL R+FLE + S+TS HS+P+RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH Sbjct: 914 LSKLARKFLENNPCSDTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAH 973 Query: 123 RMCRECLFSSWRSPSNGVCPICRQHMYKNELITCPSENQFR 1 MCRECL SSWR+P +G+CPICR+ + K +LITCPSEN+FR Sbjct: 974 LMCRECLLSSWRTPLSGLCPICRKLLKKTDLITCPSENRFR 1014 >ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3-like [Vitis vinifera] Length = 1224 Score = 159 bits (402), Expect = 2e-37 Identities = 72/101 (71%), Positives = 87/101 (86%), Gaps = 2/101 (1%) Frame = -2 Query: 297 LDKLTRQFLETS--SNTSGHSVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAH 124 L KL R+FLE + S+TS HS+P+RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH Sbjct: 945 LSKLARKFLENNPCSDTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAH 1004 Query: 123 RMCRECLFSSWRSPSNGVCPICRQHMYKNELITCPSENQFR 1 MCRECL SSWR+P +G+CPICR+ + K +LITCPSEN+FR Sbjct: 1005 LMCRECLLSSWRTPLSGLCPICRKLLKKTDLITCPSENRFR 1045 >emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] Length = 1249 Score = 158 bits (400), Expect = 4e-37 Identities = 72/101 (71%), Positives = 86/101 (85%), Gaps = 2/101 (1%) Frame = -2 Query: 297 LDKLTRQFLETS--SNTSGHSVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAH 124 L KL R+FLE + S TS HS+P+RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH Sbjct: 970 LSKLARKFLENNPCSXTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAH 1029 Query: 123 RMCRECLFSSWRSPSNGVCPICRQHMYKNELITCPSENQFR 1 MCRECL SSWR+P +G+CPICR+ + K +LITCPSEN+FR Sbjct: 1030 LMCRECLLSSWRTPLSGLCPICRKLLKKTDLITCPSENRFR 1070 >ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1051 Score = 148 bits (374), Expect = 4e-34 Identities = 65/101 (64%), Positives = 85/101 (84%), Gaps = 2/101 (1%) Frame = -2 Query: 297 LDKLTRQFLETSSNTSGH--SVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAH 124 L+KL R+FLET+++++ +VP+ AY+EEVVE IRKG+N ECPIC+E ADDPV TPCAH Sbjct: 772 LNKLARRFLETNADSAAREQTVPTPAYIEEVVEDIRKGENNECPICMEYADDPVLTPCAH 831 Query: 123 RMCRECLFSSWRSPSNGVCPICRQHMYKNELITCPSENQFR 1 RMCRECL SSWR+P+ G+CPICR + K +L+TCP+EN+FR Sbjct: 832 RMCRECLLSSWRTPTTGLCPICRTLLKKADLLTCPTENKFR 872 >ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3-like [Cucumis sativus] gi|449523563|ref|XP_004168793.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3-like [Cucumis sativus] Length = 1113 Score = 148 bits (373), Expect = 5e-34 Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 2/101 (1%) Frame = -2 Query: 297 LDKLTRQFLE--TSSNTSGHSVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAH 124 L+KL R+FLE T+S T P+RAYVE+VVE IR+G+NTECPICLE ADD V TPCAH Sbjct: 834 LNKLARKFLESNTNSTTMEQVAPTRAYVEDVVECIRRGENTECPICLEFADDAVLTPCAH 893 Query: 123 RMCRECLFSSWRSPSNGVCPICRQHMYKNELITCPSENQFR 1 RMCRECL SSWR+P+ G CPICRQ + K ELITCPSE+ FR Sbjct: 894 RMCRECLLSSWRTPTCGFCPICRQMLRKTELITCPSESPFR 934