BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034958
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]   108   6e-22
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,...    99   3e-19
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18

>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = -3

Query: 228 KLEDAQTLFESMLSKQWNPDEIVWTVLIDGLLKEGQSEACMKFLHIMELRNYSPNFQTYV 49
           ++E+AQ LF++ML K+WN DEIVWTVL+DGLLKEG+ + CMK LHIME +N++PN QTYV
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 793

Query: 48  ILTRELPKEDKSFETD 1
           IL REL +  KS E++
Sbjct: 794 ILGRELSRIGKSIESE 809


>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = -3

Query: 228  KLEDAQTLFESMLSKQWNPDEIVWTVLIDGLLKEGQSEACMKFLHIMELRNYSPNFQTYV 49
            ++E+AQ LF++ML K+WN DEIVWTVL+DGLLKEG+ + CMK LHIME +N++PN QTYV
Sbjct: 874  QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 933

Query: 48   ILTRELPKEDKSFETD 1
            IL REL +  KS E++
Sbjct: 934  ILGRELSRIGKSIESE 949


>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 821

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/76 (59%), Positives = 58/76 (76%)
 Frame = -3

Query: 228 KLEDAQTLFESMLSKQWNPDEIVWTVLIDGLLKEGQSEACMKFLHIMELRNYSPNFQTYV 49
           + E+A  +F+S+L KQWN D IVWTVL+DGLL+EG S+ CMKFL++ME RN +P+  TY+
Sbjct: 733 RAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYI 792

Query: 48  ILTRELPKEDKSFETD 1
           IL REL K  KS  TD
Sbjct: 793 ILARELSKVGKSIGTD 808


>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/69 (60%), Positives = 56/69 (81%)
 Frame = -3

Query: 225 LEDAQTLFESMLSKQWNPDEIVWTVLIDGLLKEGQSEACMKFLHIMELRNYSPNFQTYVI 46
           +E+AQ +F++ML K WN DE+VWTVL+DGLLKEG+++ C+K LH+ME RN + NFQTYV+
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 45  LTRELPKED 19
           L REL   D
Sbjct: 805 LARELSALD 813


>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = -3

Query: 225 LEDAQTLFESMLSKQWNPDEIVWTVLIDGLLKEGQSEACMKFLHIMELRNYSPNFQTYVI 46
           +E+AQ +F++ML K WN DE+ WTVL+DGLLKEG+++ C+K LH+ME RN + NFQTYV+
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVM 804

Query: 45  LTRELPKED 19
           L REL   D
Sbjct: 805 LARELSALD 813