BLASTX nr result

ID: Coptis21_contig00034953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034953
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75953.1| unknown [Picea sitchensis]                              80   2e-13
ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-l...    79   3e-13
ref|XP_002881795.1| DTW domain-containing protein [Arabidopsis l...    71   8e-11
ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-l...    70   2e-10
ref|NP_181706.1| DTW domain-containing protein [Arabidopsis thal...    68   7e-10

>gb|ADE75953.1| unknown [Picea sitchensis]
          Length = 264

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = +2

Query: 83  QPNQNKPRQICSKGCARPANVCLCNVLPKQPILTSTKVVILHHPHEHRHKLATVPI 250
           +  Q + R+ C  GC RPANVCLCNVLP + + TST+++IL HPHE RHKL+TVP+
Sbjct: 7   EQKQKQQREKCRGGCERPANVCLCNVLPSEALETSTRIIILQHPHELRHKLSTVPL 62


>ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-like [Vitis vinifera]
          Length = 254

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +2

Query: 104 RQICSKGCARPANVCLCNVLPKQPILTSTKVVILHHPHEHRHKLATVPI 250
           R+IC   C+RP NVCLC  LP +PI T+T++VILHHPHEHRHKL+TVPI
Sbjct: 31  RRICDN-CSRPENVCLCGSLPSEPISTATQIVILHHPHEHRHKLSTVPI 78


>ref|XP_002881795.1| DTW domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327634|gb|EFH58054.1| DTW domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 251

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = +2

Query: 77  EEQPNQNKPRQICSKGCARPANVCLCNVLPKQPILTSTKVVILHHPHEHRHKLATVPI 250
           EE+ + +  RQIC+  C RP  +CLC+VLP   I T+TK++ILHHPHE RHKL T P+
Sbjct: 2   EEEQDAHHRRQICNN-CDRPNAICLCHVLPADLIPTNTKIIILHHPHESRHKLNTTPL 58


>ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-like [Glycine max]
          Length = 242

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 68  FEFEEQPNQNKPRQICSKGCARPANVCLCNVLPKQPILTSTKVVILHHPHEHRHKLATVP 247
           F   E+P++ + R ICS  C RP+ VCLC+ LP  PI T+T+++I+ HPHE RHKL+T P
Sbjct: 10  FPSPEEPHRQR-RSICSN-CDRPSRVCLCHALPLPPIQTTTQILIIQHPHEARHKLSTTP 67

Query: 248 I 250
           I
Sbjct: 68  I 68


>ref|NP_181706.1| DTW domain-containing protein [Arabidopsis thaliana]
           gi|2335102|gb|AAC02772.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491231|gb|AAL69440.1|
           At2g41750/T11A7.15 [Arabidopsis thaliana]
           gi|26451167|dbj|BAC42687.1| unknown protein [Arabidopsis
           thaliana] gi|56550677|gb|AAV97792.1| At2g41750
           [Arabidopsis thaliana] gi|330254934|gb|AEC10028.1| DTW
           domain-containing protein [Arabidopsis thaliana]
          Length = 253

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = +2

Query: 77  EEQPNQNKPRQICSKGCARPANVCLCNVLPKQPILTSTKVVILHHPHEHRHKLATVPI 250
           E++ + +  RQIC   C RP  +CLC+VLP   I T+T+++ILHHPHE RHKL T P+
Sbjct: 2   EDEQDAHHRRQICDN-CDRPNAICLCHVLPADLIPTNTEIIILHHPHESRHKLNTTPL 58


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