BLASTX nr result
ID: Coptis21_contig00034940
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034940 (643 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [C... 194 2e-47 ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [C... 192 3e-47 ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ... 183 3e-44 ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [G... 177 1e-42 ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus... 177 1e-42 >ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus] Length = 396 Score = 194 bits (492), Expect = 2e-47 Identities = 109/169 (64%), Positives = 126/169 (74%), Gaps = 3/169 (1%) Frame = -3 Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462 TLQTEATTLSAQLTL+QRDT+ L+ ENTELKLRLQAMEQQAQLRDALN+ALK+EVERLKI Sbjct: 229 TLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKI 288 Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF---QQHLGMDGNQNIPFQQFHPSQSNISRHPQF 291 ATGEMMS +SFNLG HHM+YAP SF QQ G G QN+ F S SN+S HP Sbjct: 289 ATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLL 348 Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144 ++SH+ SE DIS+ SSH VK+EGPS+SASES++TF Sbjct: 349 PSDSHSLSEVLQTDSLGRLQGLDISSKGSSH-VKSEGPSLSASESSTTF 396 >ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus] Length = 396 Score = 192 bits (489), Expect = 3e-47 Identities = 108/169 (63%), Positives = 126/169 (74%), Gaps = 3/169 (1%) Frame = -3 Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462 TLQTEATTLSAQLTL+QRDT+ L+ ENTELKLRLQAMEQQAQLRDALN+ALK+EVERLKI Sbjct: 229 TLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKI 288 Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF---QQHLGMDGNQNIPFQQFHPSQSNISRHPQF 291 ATGEMMS +SFNLG HHM+YAP SF QQ G G QN+ F S SN+S HP Sbjct: 289 ATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLL 348 Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144 ++SH+ SE DIS+ + S LVK+EGPS+SASES++TF Sbjct: 349 PSDSHSLSEVLQTDSLGRLQGLDISS-KGSSLVKSEGPSLSASESSTTF 396 >ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera] Length = 359 Score = 183 bits (464), Expect = 3e-44 Identities = 106/171 (61%), Positives = 123/171 (71%), Gaps = 5/171 (2%) Frame = -3 Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462 TLQTEATTLSAQLTL+QRDT+ L ENTELKLRLQAMEQQAQLRDALNEALK+EVERLKI Sbjct: 190 TLQTEATTLSAQLTLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKI 249 Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF--QQHLGMDGNQNIPFQQFHPSQSNISRHPQ-- 294 ATGE+M+S D++NLG HH+ Y SFF Q G +QNI QFHP SN+ H Q Sbjct: 250 ATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQMPQFHPFPSNMLTHHQPL 309 Query: 293 -FTANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144 A+S+A S+ DIS+ R LVK+EGPS+SASES+STF Sbjct: 310 LGAAHSNALSDMLQQDPLGRLQGLDISS-RGPSLVKSEGPSISASESSSTF 359 >ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [Glycine max] Length = 385 Score = 177 bits (450), Expect = 1e-42 Identities = 98/168 (58%), Positives = 120/168 (71%), Gaps = 2/168 (1%) Frame = -3 Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462 TLQTEATTLSAQLTLYQRDT+ L++ENTELKLRLQAMEQQAQLRDALN+AL +EVERLKI Sbjct: 219 TLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKI 278 Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFFQ--QHLGMDGNQNIPFQQFHPSQSNISRHPQFT 288 ATGE ++ +SFNLG H M YA P+FF H G G+QN+ F SQS + H Sbjct: 279 ATGEALNQSESFNLGMHQMPYAGPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQ 338 Query: 287 ANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144 NSH S+ DIS+ + + +VK+EGPS+SA+ES++TF Sbjct: 339 TNSHQMSDILQNDQLGRLQGLDISS-KGTPMVKSEGPSISANESSTTF 385 >ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus communis] gi|223542513|gb|EEF44053.1| Transcription factor RF2b, putative [Ricinus communis] Length = 386 Score = 177 bits (450), Expect = 1e-42 Identities = 103/169 (60%), Positives = 120/169 (71%), Gaps = 3/169 (1%) Frame = -3 Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462 TLQTEATTLSAQLTL+QRDT+ L+ EN ELKLRLQAMEQQAQLRDALNEALK+EVERLKI Sbjct: 220 TLQTEATTLSAQLTLFQRDTTGLSTENIELKLRLQAMEQQAQLRDALNEALKKEVERLKI 279 Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFFQQHLGMDGNQNIPFQQFHP---SQSNISRHPQF 291 AT E+MS +SFNLG H M Y P +FF H G+ N P QF P SQ++I H Sbjct: 280 ATREIMSPSESFNLGMHQMPYTPSNFF-SHPQQSGSANHPNMQFPPYAHSQTSIPGHHLH 338 Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144 NSH FSE DIS+ + ++VK+EGPS+SASES+STF Sbjct: 339 QTNSHTFSELMQNDSLGRLQGLDISS-KGPNIVKSEGPSLSASESSSTF 386