BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034940
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [C...   194   2e-47
ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [C...   192   3e-47
ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...   183   3e-44
ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [G...   177   1e-42
ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus...   177   1e-42

>ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 396

 Score =  194 bits (492), Expect = 2e-47
 Identities = 109/169 (64%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
 Frame = -3

Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462
           TLQTEATTLSAQLTL+QRDT+ L+ ENTELKLRLQAMEQQAQLRDALN+ALK+EVERLKI
Sbjct: 229 TLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKI 288

Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF---QQHLGMDGNQNIPFQQFHPSQSNISRHPQF 291
           ATGEMMS  +SFNLG HHM+YAP SF    QQ  G  G QN+    F  S SN+S HP  
Sbjct: 289 ATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLL 348

Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144
            ++SH+ SE             DIS+  SSH VK+EGPS+SASES++TF
Sbjct: 349 PSDSHSLSEVLQTDSLGRLQGLDISSKGSSH-VKSEGPSLSASESSTTF 396


>ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 396

 Score =  192 bits (489), Expect = 3e-47
 Identities = 108/169 (63%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
 Frame = -3

Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462
           TLQTEATTLSAQLTL+QRDT+ L+ ENTELKLRLQAMEQQAQLRDALN+ALK+EVERLKI
Sbjct: 229 TLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALKKEVERLKI 288

Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF---QQHLGMDGNQNIPFQQFHPSQSNISRHPQF 291
           ATGEMMS  +SFNLG HHM+YAP SF    QQ  G  G QN+    F  S SN+S HP  
Sbjct: 289 ATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLL 348

Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144
            ++SH+ SE             DIS+ + S LVK+EGPS+SASES++TF
Sbjct: 349 PSDSHSLSEVLQTDSLGRLQGLDISS-KGSSLVKSEGPSLSASESSTTF 396


>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score =  183 bits (464), Expect = 3e-44
 Identities = 106/171 (61%), Positives = 123/171 (71%), Gaps = 5/171 (2%)
 Frame = -3

Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462
           TLQTEATTLSAQLTL+QRDT+ L  ENTELKLRLQAMEQQAQLRDALNEALK+EVERLKI
Sbjct: 190 TLQTEATTLSAQLTLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKI 249

Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFF--QQHLGMDGNQNIPFQQFHPSQSNISRHPQ-- 294
           ATGE+M+S D++NLG HH+ Y   SFF  Q   G   +QNI   QFHP  SN+  H Q  
Sbjct: 250 ATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQMPQFHPFPSNMLTHHQPL 309

Query: 293 -FTANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144
              A+S+A S+             DIS+ R   LVK+EGPS+SASES+STF
Sbjct: 310 LGAAHSNALSDMLQQDPLGRLQGLDISS-RGPSLVKSEGPSISASESSSTF 359


>ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 385

 Score =  177 bits (450), Expect = 1e-42
 Identities = 98/168 (58%), Positives = 120/168 (71%), Gaps = 2/168 (1%)
 Frame = -3

Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462
           TLQTEATTLSAQLTLYQRDT+ L++ENTELKLRLQAMEQQAQLRDALN+AL +EVERLKI
Sbjct: 219 TLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKI 278

Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFFQ--QHLGMDGNQNIPFQQFHPSQSNISRHPQFT 288
           ATGE ++  +SFNLG H M YA P+FF    H G  G+QN+    F  SQS +  H    
Sbjct: 279 ATGEALNQSESFNLGMHQMPYAGPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQ 338

Query: 287 ANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144
            NSH  S+             DIS+ + + +VK+EGPS+SA+ES++TF
Sbjct: 339 TNSHQMSDILQNDQLGRLQGLDISS-KGTPMVKSEGPSISANESSTTF 385


>ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus communis]
           gi|223542513|gb|EEF44053.1| Transcription factor RF2b,
           putative [Ricinus communis]
          Length = 386

 Score =  177 bits (450), Expect = 1e-42
 Identities = 103/169 (60%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
 Frame = -3

Query: 641 TLQTEATTLSAQLTLYQRDTSSLAAENTELKLRLQAMEQQAQLRDALNEALKREVERLKI 462
           TLQTEATTLSAQLTL+QRDT+ L+ EN ELKLRLQAMEQQAQLRDALNEALK+EVERLKI
Sbjct: 220 TLQTEATTLSAQLTLFQRDTTGLSTENIELKLRLQAMEQQAQLRDALNEALKKEVERLKI 279

Query: 461 ATGEMMSSGDSFNLGTHHMSYAPPSFFQQHLGMDGNQNIPFQQFHP---SQSNISRHPQF 291
           AT E+MS  +SFNLG H M Y P +FF  H    G+ N P  QF P   SQ++I  H   
Sbjct: 280 ATREIMSPSESFNLGMHQMPYTPSNFF-SHPQQSGSANHPNMQFPPYAHSQTSIPGHHLH 338

Query: 290 TANSHAFSEXXXXXXXXXXXXXDISNGRSSHLVKTEGPSVSASESNSTF 144
             NSH FSE             DIS+ +  ++VK+EGPS+SASES+STF
Sbjct: 339 QTNSHTFSELMQNDSLGRLQGLDISS-KGPNIVKSEGPSLSASESSSTF 386