BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034930
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ48943.1| clp protease proteolytic subunit, partial [Trades...    57   2e-06
gb|ADM92652.1| clp protease proteolytic subunit protein [Davidia...    55   8e-06
gb|ADD31110.1| clp protease proteolytic subunit protein [Ximenia...    55   8e-06
gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba ...    55   8e-06
gb|AEX96572.1| clp protease proteolytic subunit (chloroplast) [C...    54   1e-05

>gb|AEZ48943.1| clp protease proteolytic subunit, partial [Tradescantia ohiensis]
          Length = 201

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +1

Query: 277 YIIRVMIHQPASSYYEAQTGEFVLEAEEL 363
           YIIRVMIHQPASS+YEAQ GEF+LEAEEL
Sbjct: 124 YIIRVMIHQPASSFYEAQAGEFILEAEEL 152


>gb|ADM92652.1| clp protease proteolytic subunit protein [Davidia involucrata]
          Length = 195

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 286 RVMIHQPASSYYEAQTGEFVLEAEEL 363
           RVMIHQPASSYYEAQTGEF+LEAEEL
Sbjct: 121 RVMIHQPASSYYEAQTGEFILEAEEL 146


>gb|ADD31110.1| clp protease proteolytic subunit protein [Ximenia americana]
          Length = 198

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 283 IRVMIHQPASSYYEAQTGEFVLEAEEL 363
           IRVMIHQPASSY+EAQTGEF+LEAEEL
Sbjct: 123 IRVMIHQPASSYFEAQTGEFILEAEEL 149


>gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba japonica]
          Length = 198

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +1

Query: 283 IRVMIHQPASSYYEAQTGEFVLEAEEL 363
           IRVMIHQPASS+YEAQTGEF+LEAEEL
Sbjct: 123 IRVMIHQPASSFYEAQTGEFILEAEEL 149


>gb|AEX96572.1| clp protease proteolytic subunit (chloroplast) [Calibanus hookerii]
          Length = 210

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/34 (76%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
 Frame = +1

Query: 265 HSLCY-IIRVMIHQPASSYYEAQTGEFVLEAEEL 363
           H++ Y  IRVMIHQPASS+YEAQ GEF+LEAEEL
Sbjct: 120 HAMLYQYIRVMIHQPASSFYEAQAGEFILEAEEL 153