BLASTX nr result
ID: Coptis21_contig00034929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034929 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr... 112 3e-23 ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-... 110 9e-23 ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-... 110 9e-23 gb|AFK40115.1| unknown [Lotus japonicus] 110 2e-22 ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 >ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 331 Score = 112 bits (280), Expect = 3e-23 Identities = 53/88 (60%), Positives = 65/88 (73%) Frame = -3 Query: 279 PTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFTIGFDIEWKPTFKRGEVPRKA 100 P FGG IVY RT +EVEKAT EL++ ++ K+K + + +GFDIEW+PTF++G KA Sbjct: 115 PKINFGGHIVYSRTVTEVEKATAELLKIVETKKKELGQAILGFDIEWRPTFRKGVSQGKA 174 Query: 99 AVMQICGDMSCCYVFHIIHSGIPLNLQS 16 AVMQICG S CYV HIIHSGIP NL S Sbjct: 175 AVMQICGGNSHCYVMHIIHSGIPRNLXS 202 >ref|XP_004171094.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus] Length = 314 Score = 110 bits (276), Expect = 9e-23 Identities = 51/89 (57%), Positives = 68/89 (76%) Frame = -3 Query: 282 YPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFTIGFDIEWKPTFKRGEVPRK 103 +P +GGRI+Y RT SEV++A+ EL + I +K +D+ TIGFDIEW+P+FKRG P K Sbjct: 108 FPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMDQITIGFDIEWRPSFKRGVPPGK 167 Query: 102 AAVMQICGDMSCCYVFHIIHSGIPLNLQS 16 AAVMQ+C + S C+V HIIHSGIP +LQ+ Sbjct: 168 AAVMQLCLENSECHVMHIIHSGIPQSLQA 196 >ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus] Length = 314 Score = 110 bits (276), Expect = 9e-23 Identities = 51/89 (57%), Positives = 68/89 (76%) Frame = -3 Query: 282 YPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFTIGFDIEWKPTFKRGEVPRK 103 +P +GGRI+Y RT SEV++A+ EL + I +K +D+ TIGFDIEW+P+FKRG P K Sbjct: 108 FPALNYGGRIIYSRTVSEVDRASRELAKKINSTRKAMDQITIGFDIEWRPSFKRGVPPGK 167 Query: 102 AAVMQICGDMSCCYVFHIIHSGIPLNLQS 16 AAVMQ+C + S C+V HIIHSGIP +LQ+ Sbjct: 168 AAVMQLCLENSECHVMHIIHSGIPQSLQA 196 >gb|AFK40115.1| unknown [Lotus japonicus] Length = 209 Score = 110 bits (274), Expect = 2e-22 Identities = 48/87 (55%), Positives = 65/87 (74%) Frame = -3 Query: 279 PTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFTIGFDIEWKPTFKRGEVPRKA 100 P KF G+I Y R++ +V+KA +L+E +++K++ + R IGFDIEW+P+F RG P K Sbjct: 4 PVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRGVPPGKV 63 Query: 99 AVMQICGDMSCCYVFHIIHSGIPLNLQ 19 AVMQICGD S C+V H+IHSGIP NLQ Sbjct: 64 AVMQICGDTSHCHVLHLIHSGIPQNLQ 90 >ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1| predicted protein [Populus trichocarpa] Length = 323 Score = 108 bits (269), Expect = 6e-22 Identities = 50/88 (56%), Positives = 65/88 (73%) Frame = -3 Query: 282 YPTYKFGGRIVYCRTYSEVEKATVELMEHIQDKQKNVDRFTIGFDIEWKPTFKRGEVPRK 103 YP KFGG+I+Y RT EVEKA EL++ ++ +++ +DR IGFDIEWKP+F G +P K Sbjct: 111 YPAMKFGGQILYSRTSIEVEKAARELLQSLEAEKREMDRVIIGFDIEWKPSFTTGVLPGK 170 Query: 102 AAVMQICGDMSCCYVFHIIHSGIPLNLQ 19 AAVMQIC + S C+V HI HSGI +LQ Sbjct: 171 AAVMQICANTSLCHVMHIFHSGITPSLQ 198