BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034925
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   156   1e-36
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              156   1e-36
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   155   3e-36
ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29

>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/89 (78%), Positives = 80/89 (89%)
 Frame = -3

Query: 356 QTESIPFDMEEAQKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCVDCHSAIKLIS 177
           +T+S+P DM+++ KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVCVDCHSAIK IS
Sbjct: 593 RTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFIS 652

Query: 176 KVVGRKMIVRDNSRFHHFGDGLCSCGDFW 90
           KV GRK+IVRDNSRFHHF DG CSCGD+W
Sbjct: 653 KVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/89 (78%), Positives = 80/89 (89%)
 Frame = -3

Query: 356 QTESIPFDMEEAQKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCVDCHSAIKLIS 177
           +T+S+P DM+++ KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVCVDCHSAIK IS
Sbjct: 528 RTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFIS 587

Query: 176 KVVGRKMIVRDNSRFHHFGDGLCSCGDFW 90
           KV GRK+IVRDNSRFHHF DG CSCGD+W
Sbjct: 588 KVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = -3

Query: 353 TESIPFDMEEAQKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCVDCHSAIKLISK 174
           T+S+P DM++  KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVCVDCHSAIK ISK
Sbjct: 594 TDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISK 653

Query: 173 VVGRKMIVRDNSRFHHFGDGLCSCGDFW 90
           V GRK+IVRDNSRFHHF DG CSCGD+W
Sbjct: 654 VTGRKIIVRDNSRFHHFTDGSCSCGDYW 681


>ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = -3

Query: 356 QTESIPFDMEEAQKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCVDCHSAIKLIS 177
           QTES+  DM++  KE+ LH+HSERIA+AF+L++ P G PIIVKKNLRVC DCHSA+K IS
Sbjct: 663 QTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFIS 722

Query: 176 KVVGRKMIVRDNSRFHHFGDGLCSCGDFW 90
           KV  R +IVRD SRFHHF +G CSCGD+W
Sbjct: 723 KVTERNIIVRDISRFHHFSNGSCSCGDYW 751


>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/88 (69%), Positives = 72/88 (81%)
 Frame = -3

Query: 353 TESIPFDMEEAQKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCVDCHSAIKLISK 174
           T  +P ++E+  K+R L +HSERIA+AFALISMPA KPIIVKKNLR+C DCHSA+K ISK
Sbjct: 608 TRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISK 667

Query: 173 VVGRKMIVRDNSRFHHFGDGLCSCGDFW 90
           V  R +IVRDNSRFHHF  G CSCGD+W
Sbjct: 668 VENRDIIVRDNSRFHHFVKGGCSCGDYW 695