BLASTX nr result
ID: Coptis21_contig00034924
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034924 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABN08954.1| Ribonuclease H [Medicago truncatula] 77 1e-12 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 73 3e-11 ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 65 4e-09 gb|ABN08796.1| Ribonuclease H [Medicago truncatula] 65 4e-09 ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 63 2e-08 >gb|ABN08954.1| Ribonuclease H [Medicago truncatula] Length = 175 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Frame = +2 Query: 2 DGSSIGNPGCGGAGEVFRDNQNKVLGVLAQELGVVTDYEAEY*AILLAVECAVRKNWRNI 181 DGS+ G P CG G VFR+ Q LG AQ +G T ++AE A + A+E ++ N R+I Sbjct: 16 DGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDI 75 Query: 182 WIEVK*LNCSGAISKWSLNGVNIPWMIRAQWTRATSLLTSWR--LTHIYGEAHFGADA 349 W+E S + K + ++PW +R +W +L + THI+ E + GAD+ Sbjct: 76 WLETD----SKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGNAGADS 129 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 72.8 bits (177), Expect = 3e-11 Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +2 Query: 2 DGSSIGNPGCGGAGEVFRDNQNKVLGVLAQELGVVTDYEAEY*AILLAVECAVRKNWRNI 181 DGS +G+P CG G +FR +Q G AQ +G T EAEY A + A+E A + NI Sbjct: 258 DGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNI 317 Query: 182 WIEVK*LNCSGAISKWSLNGVNIPWMIRAQWTRATSLLTSWR--LTHIYGEAHFGADA 349 WIE +N I + N +PW + +W S R TH+ E + ADA Sbjct: 318 WIETDSVN---VIRAFHFN-TGVPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADA 371 >ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] Length = 666 Score = 65.5 bits (158), Expect = 4e-09 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +2 Query: 2 DGSSIGNPGCGGAGEVFRDNQNKVLGVLAQELGVVTDYEAEY*AILLAVECAVRKNWRNI 181 DGSS+G CG G V RD+ + LG ++ +G T EAE+ A ++A+E A ++ Sbjct: 229 DGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHV 288 Query: 182 WIEVK*LNCSGAISKWSLNGVNIPWMIRAQWTRATSLL--TSWRLTHIYGEAHFGADA 349 +E L A +K G+ +PW +RA+W S HI E + ADA Sbjct: 289 CLETDSLKVVNAFNK----GLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADA 342 >gb|ABN08796.1| Ribonuclease H [Medicago truncatula] Length = 221 Score = 65.5 bits (158), Expect = 4e-09 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +2 Query: 2 DGSSIGNPGCGGAGEVFRDNQNKVLGVLAQELGVVTDYEAEY*AILLAVECAVRKNWRNI 181 DGSS+G CG G V RD+ + LG ++ +G T EAE+ A ++A+E A ++ Sbjct: 66 DGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHV 125 Query: 182 WIEVK*LNCSGAISKWSLNGVNIPWMIRAQWTRATSLL--TSWRLTHIYGEAHFGADA 349 +E L A +K G+ +PW +RA+W S HI E + ADA Sbjct: 126 CLETDSLKVVNAFNK----GLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADA 179 >ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Length = 1004 Score = 63.2 bits (152), Expect = 2e-08 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 3/118 (2%) Frame = +2 Query: 2 DGSSIG-NPGCGGAGEVFRDNQNKVLGVLAQELGVVTDYEAEY*AILLAVECAVRKNWRN 178 DG+S + CGG VFRD L A+ LG + Y+ E AI+ VE A ++NWRN Sbjct: 238 DGASTATSSSCGG---VFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRN 294 Query: 179 IWIEVK*LNCSGAISKWSLNGVNIPWMIRAQWTRATSLL--TSWRLTHIYGEAHFGAD 346 IWIE A K S+ IP +R +W LL ++ +THIY E + AD Sbjct: 295 IWIESDSALVVMAFKKMSM----IPCRLRNRWINCRKLLCRMNFVITHIYREDNRCAD 348